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academic/python3-scipy: Add missing python3-mesonpy dependency. #3374

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Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com>
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✅ sbolint - academic/python3-scipy ✅

sbolint: python3-scipy checks out OK

@aclemons
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@bassmadrigal I think you missed actually adding the updated meson as a dependency in #3356?

# needs newer meson
export PYTHONPATH=/opt/python3.9/site-packages/

@aclemons
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This still fails to build for me. See below.

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@sbo-bot: build i586 academic/python3-scipy

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sbo-bot bot commented Oct 15, 2023

buildpkg i586 academic/python3-scipy

Creating hintfile directory: /etc/repo/SBo/hintfiles
Checking whether git is clean ... no.
Indexing SlackBuilds ... done.
git repo: /var/lib/repo/SBo/slackbuilds
branch:   HEAD
date:     Sun Oct 15 03:54:12 GMT 2023
revision: 1e437d5f16e6b042187c24299330b64e24dfe21a (DIRTY)
title:    Merge 6734e8b3f398b3d9ad02198711c239c748b85c0b into f8046ba12f8863df2669920f6188beddc40dfe26

================================================================================
academic/python3-scipy                                                  03:56:50
================================================================================

Calculating dependencies ... 
Dependency tree:
academic/python3-scipy (update for version 1.11.3)
  python/python3-pythran (ok)
    python/python3-pytest-runner (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-pytest (ok)
        python/python3-pluggy (ok)
        python/python3-iniconfig (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-hatch_vcs (ok)
            python/python3-hatchling (ok)
              python/python3-trove-classifiers (ok)
                python/python3-calver (ok)
                  python/python3-wheel (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (ok)
                  python/python3-build (ok)
                    python/python3-pyproject-hooks (ok)
                      python/python3-installer (ok)
                        python/python3-flit_core (ok)
                      python/python3-flit_core (updated)
                    python/python-importlib_metadata (ok)
                      python/python-zipp (ok)
              python/python3-pluggy (ok)
              python/python3-pathspec (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
              python/python3-editables (ok)
                python/python3-wheel (ok)
                  python/python3-installer (ok)
                    python/python3-flit_core (ok)
                  python/python3-flit_core (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
        python/python3-exceptiongroup (ok)
          python/python3-flit_scm (ok)
            python/python3-build (ok)
              python/python3-pyproject-hooks (ok)
                python/python3-installer (ok)
                  python/python3-flit_core (ok)
                python/python3-flit_core (updated)
              python/python-importlib_metadata (ok)
                python/python-zipp (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-beniget (ok)
      python/python3-gast (ok)
    development/python3-numpy (ok)
    academic/xsimd (ok)
      desktop/doctest (ok)
  python/python3-mesonpy (ok)
    python/python3-pyproject-metadata (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-meson-opt (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
  python/pybind11 (ok)
  libraries/lapack (ok)
    libraries/blas (ok)
  development/python3-numpy (updated)

Building academic/python3-scipy (update for version 1.11.3) ----------- 03:56:55
Testing SlackBuild files ... done.
Downloading source files ...
Verifying source files ... done.
Installing dependencies ...
python3-numpy-1.24.4-i586-1_SBo: Python3 extension for scientific comput [  34M]
blas-3.11.0-i586-2_SBo: Basic Linear Algebra Subprograms ............... [ 670K]
lapack-3.11.0-i586-2_SBo: linear algebra routines ...................... [  14M]
pybind11-2.11.1-i586-1_SBo: Python bindings for C++11 .................. [ 2.5M]
python-zipp-3.8.0-i586-2_SBo: pathlib-compatible Zipfile object wrapper  [  50K]
python-importlib_metadata-4.10.1-i586-3_SBo: Python package metadata ... [ 130K]
python3-flit_core-3.9.0-i586-1_SBo: Simplified pkging of Python modules, [ 140K]
python3-installer-0.7.0-i586-2_SBo: Library for installing Python packag [ 1.1M]
python3-pyproject-hooks-1.0.0-i586-2_SBo: Wrappers to call PEP 517 build [ 110K]
python3-build-1.0.3-i586-2_SBo: a simple, correct PEP517 package builder [ 180K]
python3-wheel-0.41.2-i586-1_SBo: A built-package format for Python ..... [ 600K]
python3-meson-opt-1.2.2-noarch-1_SBo: meson installed to /opt .......... [ 9.0M]
python3-pyproject-metadata-0.7.1-i586-1_SBo: PEP 621 metadata parsing .. [  90K]
python3-mesonpy-0.14.0-i586-1_SBo: Meson Python build backend, PEP517 .. [ 240K]
doctest-2.4.9-i586-1_SBo: C++ testing framework ........................ [ 440K]
xsimd-11.1.0-i586-3_SBo: C++ wrappers for SIMD intrinsics .............. [ 1.2M]
python3-gast-0.5.4-i586-3_SBo: AST that abstracts the underlying Python  [ 200K]
python3-beniget-0.4.1-i586-7_SBo: static analyzer for Python code ...... [ 100K]
python3-flit_scm-1.7.0-i586-4_SBo: PEP 518 build backend library for SCM [  30K]
python3-exceptiongroup-1.1.3-i586-1_SBo: Backport of PEP 654 exception g [ 140K]
python3-editables-0.5-i586-2_SBo: A Python library for creating editable [  50K]
python3-pathspec-0.11.2-i586-2_SBo: Library for gitignore style matching [ 250K]
python3-pluggy-1.3.0-i586-2_SBo: mechanisms for python ................. [ 160K]
python3-calver-2022.6.26-i586-7_SBo: setuptools extension for CalVer pac [  60K]
python3-trove-classifiers-2023.9.19-i586-1_SBo: Canonical source for cla [ 160K]
python3-hatchling-1.18.0-i586-4_SBo: Hatch build backend ............... [ 930K]
python3-hatch_vcs-0.3.0-i586-11_SBo: Hatch plugin for versioning with pr [  80K]
python3-iniconfig-2.0.0-i586-2_SBo: ini file parsing ................... [  60K]
python3-pytest-7.4.2-i586-2_SBo: simple powerful testing with Python ... [ 2.2M]
python3-pytest-runner-6.0.0-i586-14_SBo: invoke py.test as a distutils c [  70K]
python3-pythran-0.13.1-i586-7_SBo: Ahead of Time compiler for numeric ke [ 5.6M]
Running python3-scipy.SlackBuild ...                                ETA 04:12:??
env MAKEFLAGS='-j24 -l13' nice -n 5 bash ./python3-scipy.SlackBuild
academic/python3-scipy: python3-scipy.SlackBuild failed (status 1)      03:57:26
../scipy/meson.build:159:9: ERROR: Dependency "OpenBLAS" not found, tried pkgconfig and cmake
See /var/log/repo/SBo/academic/python3-scipy/build.log
Unmounting chroot ... done.
⛔️ academic/python3-scipy FAILED ⛔️

================================================================================
SUMMARY                                                                 03:57:26
================================================================================

Logfile:     /var/log/repo/SBo/repo_2023-10-15_03:56:49.log
Runtime:     0h 0m 37s
Failed:      1
  academic/python3-scipy

@aclemons
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Did you have OpenBLAS installed when you tested this? If I add it as a dependency, the package builds. Is this correct?

@bassmadrigal
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Shoot, I must've updated it in my chroot and forgot to change it in my local repo. I'll double check everything tomorrow unless you beat me to it.

@aclemons
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No rush - just ping me back here and we can update and test again.

@willysr
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willysr commented Oct 15, 2023

i think adding python3-meson-opt should fix it

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willysr commented Oct 15, 2023

@sbo-bot: build academic/python3-scipy

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✅ sbolint - academic/python3-scipy ✅

sbolint: python3-scipy checks out OK

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sbo-bot bot commented Oct 15, 2023

buildpkg i586 academic/python3-scipy

Creating hintfile directory: /etc/repo/SBo/hintfiles
Checking whether git is clean ... no.
Indexing SlackBuilds ... done.
git repo: /var/lib/repo/SBo/slackbuilds
branch:   HEAD
date:     Sun Oct 15 04:34:34 GMT 2023
revision: d5feeead009ea1868689f9cc32ae1b0f7bd8a0f3 (DIRTY)
title:    Merge 495e524a17d6d852ea5b25a4e3d890e9d3daf417 into f8046ba12f8863df2669920f6188beddc40dfe26

================================================================================
academic/python3-scipy                                                  04:35:22
================================================================================

Calculating dependencies ... 
Dependency tree:
academic/python3-scipy (update for version 1.11.3)
  python/python3-pythran (ok)
    python/python3-pytest-runner (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-pytest (ok)
        python/python3-pluggy (ok)
        python/python3-iniconfig (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-hatch_vcs (ok)
            python/python3-hatchling (ok)
              python/python3-trove-classifiers (ok)
                python/python3-calver (ok)
                  python/python3-wheel (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (ok)
                  python/python3-build (ok)
                    python/python3-pyproject-hooks (ok)
                      python/python3-installer (ok)
                        python/python3-flit_core (ok)
                      python/python3-flit_core (updated)
                    python/python-importlib_metadata (ok)
                      python/python-zipp (ok)
              python/python3-pluggy (ok)
              python/python3-pathspec (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
              python/python3-editables (ok)
                python/python3-wheel (ok)
                  python/python3-installer (ok)
                    python/python3-flit_core (ok)
                  python/python3-flit_core (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
        python/python3-exceptiongroup (ok)
          python/python3-flit_scm (ok)
            python/python3-build (ok)
              python/python3-pyproject-hooks (ok)
                python/python3-installer (ok)
                  python/python3-flit_core (ok)
                python/python3-flit_core (updated)
              python/python-importlib_metadata (ok)
                python/python-zipp (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-beniget (ok)
      python/python3-gast (ok)
    development/python3-numpy (ok)
    academic/xsimd (ok)
      desktop/doctest (ok)
  python/python3-mesonpy (ok)
    python/python3-pyproject-metadata (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-meson-opt (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
  python/python3-meson-opt (ok)
    python/python3-wheel (ok)
      python/python3-installer (ok)
        python/python3-flit_core (ok)
      python/python3-flit_core (ok)
    python/python3-build (ok)
      python/python3-pyproject-hooks (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (updated)
      python/python-importlib_metadata (ok)
        python/python-zipp (ok)
  python/pybind11 (ok)
  libraries/lapack (ok)
    libraries/blas (ok)
  development/python3-numpy (updated)

Building academic/python3-scipy (update for version 1.11.3) ----------- 04:35:27
Testing SlackBuild files ... done.
Downloading source files ...
Verifying source files ... done.
Installing dependencies ...
python3-numpy-1.24.4-i586-1_SBo: Python3 extension for scientific comput [  34M]
blas-3.11.0-i586-2_SBo: Basic Linear Algebra Subprograms ............... [ 670K]
lapack-3.11.0-i586-2_SBo: linear algebra routines ...................... [  14M]
pybind11-2.11.1-i586-1_SBo: Python bindings for C++11 .................. [ 2.5M]
python-zipp-3.8.0-i586-2_SBo: pathlib-compatible Zipfile object wrapper  [  50K]
python-importlib_metadata-4.10.1-i586-3_SBo: Python package metadata ... [ 130K]
python3-flit_core-3.9.0-i586-1_SBo: Simplified pkging of Python modules, [ 140K]
python3-installer-0.7.0-i586-2_SBo: Library for installing Python packag [ 1.1M]
python3-pyproject-hooks-1.0.0-i586-2_SBo: Wrappers to call PEP 517 build [ 110K]
python3-build-1.0.3-i586-2_SBo: a simple, correct PEP517 package builder [ 180K]
python3-wheel-0.41.2-i586-1_SBo: A built-package format for Python ..... [ 600K]
python3-meson-opt-1.2.2-noarch-1_SBo: meson installed to /opt .......... [ 9.0M]
python3-pyproject-metadata-0.7.1-i586-1_SBo: PEP 621 metadata parsing .. [  90K]
python3-mesonpy-0.14.0-i586-1_SBo: Meson Python build backend, PEP517 .. [ 240K]
doctest-2.4.9-i586-1_SBo: C++ testing framework ........................ [ 440K]
xsimd-11.1.0-i586-3_SBo: C++ wrappers for SIMD intrinsics .............. [ 1.2M]
python3-gast-0.5.4-i586-3_SBo: AST that abstracts the underlying Python  [ 200K]
python3-beniget-0.4.1-i586-7_SBo: static analyzer for Python code ...... [ 100K]
python3-flit_scm-1.7.0-i586-4_SBo: PEP 518 build backend library for SCM [  30K]
python3-exceptiongroup-1.1.3-i586-1_SBo: Backport of PEP 654 exception g [ 140K]
python3-editables-0.5-i586-2_SBo: A Python library for creating editable [  50K]
python3-pathspec-0.11.2-i586-2_SBo: Library for gitignore style matching [ 250K]
python3-pluggy-1.3.0-i586-2_SBo: mechanisms for python ................. [ 160K]
python3-calver-2022.6.26-i586-7_SBo: setuptools extension for CalVer pac [  60K]
python3-trove-classifiers-2023.9.19-i586-1_SBo: Canonical source for cla [ 160K]
python3-hatchling-1.18.0-i586-4_SBo: Hatch build backend ............... [ 930K]
python3-hatch_vcs-0.3.0-i586-11_SBo: Hatch plugin for versioning with pr [  80K]
python3-iniconfig-2.0.0-i586-2_SBo: ini file parsing ................... [  60K]
python3-pytest-7.4.2-i586-2_SBo: simple powerful testing with Python ... [ 2.2M]
python3-pytest-runner-6.0.0-i586-14_SBo: invoke py.test as a distutils c [  70K]
python3-pythran-0.13.1-i586-7_SBo: Ahead of Time compiler for numeric ke [ 5.6M]
Running python3-scipy.SlackBuild ...                                ETA 04:50:??
env MAKEFLAGS='-j24 -l13' nice -n 5 bash ./python3-scipy.SlackBuild
academic/python3-scipy: python3-scipy.SlackBuild failed (status 1)      04:35:58
../scipy/meson.build:159:9: ERROR: Dependency "OpenBLAS" not found, tried pkgconfig and cmake
See /var/log/repo/SBo/academic/python3-scipy/build.log
Unmounting chroot ... done.
⛔️ academic/python3-scipy FAILED ⛔️

================================================================================
SUMMARY                                                                 04:35:59
================================================================================

Logfile:     /var/log/repo/SBo/repo_2023-10-15_04:35:21.log
Runtime:     0h 0m 38s
Failed:      1
  academic/python3-scipy

@willysr
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willysr commented Oct 15, 2023

oh openblas

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sbo-bot bot commented Oct 15, 2023

buildpkg x86_64 academic/python3-scipy

Creating hintfile directory: /etc/repo/SBo/hintfiles
Checking whether git is clean ... no.
Indexing SlackBuilds ... done.
git repo: /var/lib/repo/SBo/slackbuilds
branch:   HEAD
date:     Sun Oct 15 04:34:34 GMT 2023
revision: d5feeead009ea1868689f9cc32ae1b0f7bd8a0f3 (DIRTY)
title:    Merge 495e524a17d6d852ea5b25a4e3d890e9d3daf417 into f8046ba12f8863df2669920f6188beddc40dfe26

================================================================================
academic/python3-scipy                                                  04:36:38
================================================================================

Calculating dependencies ... 
Dependency tree:
academic/python3-scipy (update for git 495e524)
  python/python3-pythran (ok)
    python/python3-pytest-runner (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-pytest (ok)
        python/python3-pluggy (ok)
        python/python3-iniconfig (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-hatch_vcs (ok)
            python/python3-hatchling (ok)
              python/python3-trove-classifiers (ok)
                python/python3-calver (ok)
                  python/python3-wheel (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (ok)
                  python/python3-build (ok)
                    python/python3-pyproject-hooks (ok)
                      python/python3-installer (ok)
                        python/python3-flit_core (ok)
                      python/python3-flit_core (updated)
                    python/python-importlib_metadata (ok)
                      python/python-zipp (ok)
              python/python3-pluggy (ok)
              python/python3-pathspec (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
              python/python3-editables (ok)
                python/python3-wheel (ok)
                  python/python3-installer (ok)
                    python/python3-flit_core (ok)
                  python/python3-flit_core (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
        python/python3-exceptiongroup (ok)
          python/python3-flit_scm (ok)
            python/python3-build (ok)
              python/python3-pyproject-hooks (ok)
                python/python3-installer (ok)
                  python/python3-flit_core (ok)
                python/python3-flit_core (updated)
              python/python-importlib_metadata (ok)
                python/python-zipp (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-beniget (ok)
      python/python3-gast (ok)
    development/python3-numpy (ok)
    academic/xsimd (ok)
      desktop/doctest (ok)
  python/python3-mesonpy (ok)
    python/python3-pyproject-metadata (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-meson-opt (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
  python/python3-meson-opt (ok)
    python/python3-wheel (ok)
      python/python3-installer (ok)
        python/python3-flit_core (ok)
      python/python3-flit_core (ok)
    python/python3-build (ok)
      python/python3-pyproject-hooks (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (updated)
      python/python-importlib_metadata (ok)
        python/python-zipp (ok)
  python/pybind11 (ok)
  libraries/lapack (ok)
    libraries/blas (ok)
  development/python3-numpy (ok)

Building academic/python3-scipy (update for git 495e524) -------------- 04:36:42
Testing SlackBuild files ... done.
Downloading source files ...
Verifying source files ... done.
Installing dependencies ...
python3-numpy-1.24.4-x86_64-1_SBo: Python3 extension for scientific comp [  34M]
blas-3.11.0-x86_64-2_SBo: Basic Linear Algebra Subprograms ............. [ 660K]
lapack-3.11.0-x86_64-2_SBo: linear algebra routines .................... [  13M]
pybind11-2.11.1-x86_64-1_SBo: Python bindings for C++11 ................ [ 2.5M]
python-zipp-3.8.0-x86_64-2_SBo: pathlib-compatible Zipfile object wrappe [  50K]
python-importlib_metadata-4.10.1-x86_64-3_SBo: Python package metadata . [ 130K]
python3-flit_core-3.9.0-x86_64-1_SBo: Simplified pkging of Python module [ 140K]
python3-installer-0.7.0-x86_64-2_SBo: Library for installing Python pack [ 1.1M]
python3-pyproject-hooks-1.0.0-x86_64-3_SBo: Wrappers to call PEP 517 bui [ 110K]
python3-build-1.0.3-x86_64-2_SBo: a simple, correct PEP517 package build [ 180K]
python3-wheel-0.41.2-x86_64-1_SBo: A built-package format for Python ... [ 600K]
python3-meson-opt-1.2.2-noarch-1_SBo: meson installed to /opt .......... [ 9.0M]
python3-pyproject-metadata-0.7.1-x86_64-1_SBo: PEP 621 metadata parsing  [  90K]
python3-mesonpy-0.14.0-x86_64-1_SBo: Meson Python build backend, PEP517  [ 240K]
doctest-2.4.9-x86_64-1_SBo: C++ testing framework ...................... [ 440K]
xsimd-11.1.0-x86_64-3_SBo: C++ wrappers for SIMD intrinsics ............ [ 1.2M]
python3-gast-0.5.4-x86_64-3_SBo: AST that abstracts the underlying Pytho [ 200K]
python3-beniget-0.4.1-x86_64-7_SBo: static analyzer for Python code .... [ 100K]
python3-flit_scm-1.7.0-x86_64-7_SBo: PEP 518 build backend library for S [  30K]
python3-exceptiongroup-1.1.3-x86_64-1_SBo: Backport of PEP 654 exception [ 140K]
python3-editables-0.5-x86_64-2_SBo: A Python library for creating editab [  50K]
python3-pathspec-0.11.2-x86_64-2_SBo: Library for gitignore style matchi [ 250K]
python3-pluggy-1.3.0-x86_64-2_SBo: mechanisms for python ............... [ 160K]
python3-calver-2022.6.26-x86_64-8_SBo: setuptools extension for CalVer p [  60K]
python3-trove-classifiers-2023.9.19-x86_64-1_SBo: Canonical source for c [ 160K]
python3-hatchling-1.18.0-x86_64-4_SBo: Hatch build backend ............. [ 940K]
python3-hatch_vcs-0.3.0-x86_64-12_SBo: Hatch plugin for versioning with  [  80K]
python3-iniconfig-2.0.0-x86_64-3_SBo: ini file parsing ................. [  60K]
python3-pytest-7.4.2-x86_64-2_SBo: simple powerful testing with Python . [ 2.2M]
python3-pytest-runner-6.0.0-x86_64-17_SBo: invoke py.test as a distutils [  70K]
python3-pythran-0.13.1-x86_64-8_SBo: Ahead of Time compiler for numeric  [ 5.6M]
Running python3-scipy.SlackBuild ...                                ETA 04:40:??
env MAKEFLAGS='-j24 -l13' nice -n 5 bash ./python3-scipy.SlackBuild
academic/python3-scipy: python3-scipy.SlackBuild failed (status 1)      04:37:09
../scipy/meson.build:159:9: ERROR: Dependency "OpenBLAS" not found, tried pkgconfig and cmake
See /var/log/repo/SBo/academic/python3-scipy/build.log
Unmounting chroot ... done.
⛔️ academic/python3-scipy FAILED ⛔️

================================================================================
SUMMARY                                                                 04:37:10
================================================================================

Logfile:     /var/log/repo/SBo/repo_2023-10-15_04:36:37.log
Runtime:     0h 0m 33s
Failed:      1
  academic/python3-scipy

@aclemons
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i think adding python3-meson-opt should fix it

I added python3-mesonpy already (which depends on python3-meson-opt) since it fails otherwise with:

ERROR Backend 'mesonpy' is not available.

@github-actions
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✅ sbolint - academic/python3-scipy ✅

sbolint: python3-scipy checks out OK

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
@github-actions
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✅ sbolint - academic/python3-scipy ✅

sbolint: python3-scipy checks out OK

@willysr
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willysr commented Oct 15, 2023

@sbo-bot: build academic/python3-scipy

@bassmadrigal
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That works for me. Thanks for the catch!

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sbo-bot bot commented Oct 15, 2023

buildpkg i586 academic/python3-scipy

Creating hintfile directory: /etc/repo/SBo/hintfiles
Checking whether git is clean ... no.
Indexing SlackBuilds ... done.
git repo: /var/lib/repo/SBo/slackbuilds
branch:   HEAD
date:     Sun Oct 15 04:41:05 GMT 2023
revision: 7de0f8261b50a5325c4fa56a6db450458a63e3dc (DIRTY)
title:    Merge 4af055f1839ef461dd3d99a762f4e79fdb8bc5e9 into f8046ba12f8863df2669920f6188beddc40dfe26

================================================================================
academic/python3-scipy                                                  04:45:18
================================================================================

Calculating dependencies ... 
Dependency tree:
academic/python3-scipy (update for version 1.11.3)
  python/python3-pythran (ok)
    python/python3-pytest-runner (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-pytest (ok)
        python/python3-pluggy (ok)
        python/python3-iniconfig (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-hatch_vcs (ok)
            python/python3-hatchling (ok)
              python/python3-trove-classifiers (ok)
                python/python3-calver (ok)
                  python/python3-wheel (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (ok)
                  python/python3-build (ok)
                    python/python3-pyproject-hooks (ok)
                      python/python3-installer (ok)
                        python/python3-flit_core (ok)
                      python/python3-flit_core (updated)
                    python/python-importlib_metadata (ok)
                      python/python-zipp (ok)
              python/python3-pluggy (ok)
              python/python3-pathspec (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
              python/python3-editables (ok)
                python/python3-wheel (ok)
                  python/python3-installer (ok)
                    python/python3-flit_core (ok)
                  python/python3-flit_core (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
        python/python3-exceptiongroup (ok)
          python/python3-flit_scm (ok)
            python/python3-build (ok)
              python/python3-pyproject-hooks (ok)
                python/python3-installer (ok)
                  python/python3-flit_core (ok)
                python/python3-flit_core (updated)
              python/python-importlib_metadata (ok)
                python/python-zipp (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-beniget (ok)
      python/python3-gast (ok)
    development/python3-numpy (ok)
    academic/xsimd (ok)
      desktop/doctest (ok)
  python/python3-mesonpy (ok)
    python/python3-pyproject-metadata (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-meson-opt (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
  python/pybind11 (ok)
  libraries/lapack (ok)
    libraries/blas (ok)
  libraries/OpenBLAS (ok)
  development/python3-numpy (updated)

Building academic/python3-scipy (update for version 1.11.3) ----------- 04:45:22
Testing SlackBuild files ... done.
Downloading source files ...
Verifying source files ... done.
Installing dependencies ...
python3-numpy-1.24.4-i586-1_SBo: Python3 extension for scientific comput [  34M]
OpenBLAS-0.3.23-i586-1_SBo: BLAS library ............................... [  25M]
blas-3.11.0-i586-2_SBo: Basic Linear Algebra Subprograms ............... [ 670K]
lapack-3.11.0-i586-2_SBo: linear algebra routines ...................... [  14M]
pybind11-2.11.1-i586-1_SBo: Python bindings for C++11 .................. [ 2.5M]
python-zipp-3.8.0-i586-2_SBo: pathlib-compatible Zipfile object wrapper  [  50K]
python-importlib_metadata-4.10.1-i586-3_SBo: Python package metadata ... [ 130K]
python3-flit_core-3.9.0-i586-1_SBo: Simplified pkging of Python modules, [ 140K]
python3-installer-0.7.0-i586-2_SBo: Library for installing Python packag [ 1.1M]
python3-pyproject-hooks-1.0.0-i586-2_SBo: Wrappers to call PEP 517 build [ 110K]
python3-build-1.0.3-i586-2_SBo: a simple, correct PEP517 package builder [ 180K]
python3-wheel-0.41.2-i586-1_SBo: A built-package format for Python ..... [ 600K]
python3-meson-opt-1.2.2-noarch-1_SBo: meson installed to /opt .......... [ 9.0M]
python3-pyproject-metadata-0.7.1-i586-1_SBo: PEP 621 metadata parsing .. [  90K]
python3-mesonpy-0.14.0-i586-1_SBo: Meson Python build backend, PEP517 .. [ 240K]
doctest-2.4.9-i586-1_SBo: C++ testing framework ........................ [ 440K]
xsimd-11.1.0-i586-3_SBo: C++ wrappers for SIMD intrinsics .............. [ 1.2M]
python3-gast-0.5.4-i586-3_SBo: AST that abstracts the underlying Python  [ 200K]
python3-beniget-0.4.1-i586-7_SBo: static analyzer for Python code ...... [ 100K]
python3-flit_scm-1.7.0-i586-4_SBo: PEP 518 build backend library for SCM [  30K]
python3-exceptiongroup-1.1.3-i586-1_SBo: Backport of PEP 654 exception g [ 140K]
python3-editables-0.5-i586-2_SBo: A Python library for creating editable [  50K]
python3-pathspec-0.11.2-i586-2_SBo: Library for gitignore style matching [ 250K]
python3-pluggy-1.3.0-i586-2_SBo: mechanisms for python ................. [ 160K]
python3-calver-2022.6.26-i586-7_SBo: setuptools extension for CalVer pac [  60K]
python3-trove-classifiers-2023.9.19-i586-1_SBo: Canonical source for cla [ 160K]
python3-hatchling-1.18.0-i586-4_SBo: Hatch build backend ............... [ 930K]
python3-hatch_vcs-0.3.0-i586-11_SBo: Hatch plugin for versioning with pr [  80K]
python3-iniconfig-2.0.0-i586-2_SBo: ini file parsing ................... [  60K]
python3-pytest-7.4.2-i586-2_SBo: simple powerful testing with Python ... [ 2.2M]
python3-pytest-runner-6.0.0-i586-14_SBo: invoke py.test as a distutils c [  70K]
python3-pythran-0.13.1-i586-7_SBo: Ahead of Time compiler for numeric ke [ 5.6M]
Running python3-scipy.SlackBuild ...                                ETA 05:00:??
env MAKEFLAGS='-j24 -l13' nice -n 5 bash ./python3-scipy.SlackBuild
Build time 218 sec, peak load 14.99, peak memory 1997M, peak tmp 393M
Built ok:  python3-scipy-1.11.3-i586-1_SBo.txz                          04:49:09
Testing package python3-scipy-1.11.3-i586-1_SBo.txz ... done.
Test installing python3-scipy-1.11.3-i586-1_SBo.txz ...
python3-scipy-1.11.3-i586-1_SBo: python library for math, science, and e [  94M]
Unmounting chroot ... done.
Backed up: python3-scipy-1.9.1-i586-10_SBo.txz
✅ academic/python3-scipy Updated for version 1.11.3 ✅

================================================================================
SUMMARY                                                                 04:49:16
================================================================================

Logfile:     /var/log/repo/SBo/repo_2023-10-15_04:45:17.log
Runtime:     0h 3m 59s
Updated:     1
  academic/python3-scipy/python3-scipy-1.11.3-i586-1_SBo.txz

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sbo-bot bot commented Oct 15, 2023

sbopkglint i586 academic/python3-scipy

Using tests from /usr/share/sbo-maintainer-tools/sbopkglint.d
Exploding /var/lib/repo/SBo/packages/15.0/i586/academic/python3-scipy/python3-scipy-1.11.3-i586-1_SBo.txz to /tmp/SBo/sbopkglint.zw8Tqt ...OK
Running pre-doinst test...OK
Installing /var/lib/repo/SBo/packages/15.0/i586/academic/python3-scipy/python3-scipy-1.11.3-i586-1_SBo.txz to /tmp/SBo/sbopkglint.zw8Tqt ...OK
Running test: 05-basic-sanity...OK
Running test: 10-docs...OK
Running test: 15-noarch...OK
Running test: 20-arch...OK
Running test: 25-lafiles...OK
Running test: 30-manpages...OK
Running test: 35-desktop...OK
Running test: 40-newconfig...OK
Running test: 45-doinst...OK
Running test: 50-icons...OK
Running test: 60-usr_info...OK
Running test: 65-python...OK
Running test: 70-tmp_path...OK
Running test: 75-static_libs...OK
Running test: 85-perl...OK
=== python3-scipy-1.11.3-i586-1_SBo.txz: All tests passed✅

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sbo-bot bot commented Oct 15, 2023

buildpkg x86_64 academic/python3-scipy

Creating hintfile directory: /etc/repo/SBo/hintfiles
Checking whether git is clean ... no.
Indexing SlackBuilds ... done.
git repo: /var/lib/repo/SBo/slackbuilds
branch:   HEAD
date:     Sun Oct 15 04:41:05 GMT 2023
revision: 7de0f8261b50a5325c4fa56a6db450458a63e3dc (DIRTY)
title:    Merge 4af055f1839ef461dd3d99a762f4e79fdb8bc5e9 into f8046ba12f8863df2669920f6188beddc40dfe26

================================================================================
academic/python3-scipy                                                  04:50:03
================================================================================

Calculating dependencies ... 
Dependency tree:
academic/python3-scipy (update for git 4af055f)
  python/python3-pythran (ok)
    python/python3-pytest-runner (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-pytest (ok)
        python/python3-pluggy (ok)
        python/python3-iniconfig (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-hatch_vcs (ok)
            python/python3-hatchling (ok)
              python/python3-trove-classifiers (ok)
                python/python3-calver (ok)
                  python/python3-wheel (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (ok)
                  python/python3-build (ok)
                    python/python3-pyproject-hooks (ok)
                      python/python3-installer (ok)
                        python/python3-flit_core (ok)
                      python/python3-flit_core (updated)
                    python/python-importlib_metadata (ok)
                      python/python-zipp (ok)
              python/python3-pluggy (ok)
              python/python3-pathspec (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
              python/python3-editables (ok)
                python/python3-wheel (ok)
                  python/python3-installer (ok)
                    python/python3-flit_core (ok)
                  python/python3-flit_core (ok)
                python/python3-build (ok)
                  python/python3-pyproject-hooks (ok)
                    python/python3-installer (ok)
                      python/python3-flit_core (ok)
                    python/python3-flit_core (updated)
                  python/python-importlib_metadata (ok)
                    python/python-zipp (ok)
        python/python3-exceptiongroup (ok)
          python/python3-flit_scm (ok)
            python/python3-build (ok)
              python/python3-pyproject-hooks (ok)
                python/python3-installer (ok)
                  python/python3-flit_core (ok)
                python/python3-flit_core (updated)
              python/python-importlib_metadata (ok)
                python/python-zipp (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-beniget (ok)
      python/python3-gast (ok)
    development/python3-numpy (ok)
    academic/xsimd (ok)
      desktop/doctest (ok)
  python/python3-mesonpy (ok)
    python/python3-pyproject-metadata (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
    python/python3-meson-opt (ok)
      python/python3-wheel (ok)
        python/python3-installer (ok)
          python/python3-flit_core (ok)
        python/python3-flit_core (ok)
      python/python3-build (ok)
        python/python3-pyproject-hooks (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
          python/python3-flit_core (updated)
        python/python-importlib_metadata (ok)
          python/python-zipp (ok)
  python/pybind11 (ok)
  libraries/lapack (ok)
    libraries/blas (ok)
  libraries/OpenBLAS (ok)
  development/python3-numpy (ok)

Building academic/python3-scipy (update for git 4af055f) -------------- 04:50:07
Testing SlackBuild files ... done.
Downloading source files ...
Verifying source files ... done.
Installing dependencies ...
python3-numpy-1.24.4-x86_64-1_SBo: Python3 extension for scientific comp [  34M]
OpenBLAS-0.3.23-x86_64-1_SBo: BLAS library ............................. [  33M]
blas-3.11.0-x86_64-2_SBo: Basic Linear Algebra Subprograms ............. [ 660K]
lapack-3.11.0-x86_64-2_SBo: linear algebra routines .................... [  13M]
pybind11-2.11.1-x86_64-1_SBo: Python bindings for C++11 ................ [ 2.5M]
python-zipp-3.8.0-x86_64-2_SBo: pathlib-compatible Zipfile object wrappe [  50K]
python-importlib_metadata-4.10.1-x86_64-3_SBo: Python package metadata . [ 130K]
python3-flit_core-3.9.0-x86_64-1_SBo: Simplified pkging of Python module [ 140K]
python3-installer-0.7.0-x86_64-2_SBo: Library for installing Python pack [ 1.1M]
python3-pyproject-hooks-1.0.0-x86_64-3_SBo: Wrappers to call PEP 517 bui [ 110K]
python3-build-1.0.3-x86_64-2_SBo: a simple, correct PEP517 package build [ 180K]
python3-wheel-0.41.2-x86_64-1_SBo: A built-package format for Python ... [ 600K]
python3-meson-opt-1.2.2-noarch-1_SBo: meson installed to /opt .......... [ 9.0M]
python3-pyproject-metadata-0.7.1-x86_64-1_SBo: PEP 621 metadata parsing  [  90K]
python3-mesonpy-0.14.0-x86_64-1_SBo: Meson Python build backend, PEP517  [ 240K]
doctest-2.4.9-x86_64-1_SBo: C++ testing framework ...................... [ 440K]
xsimd-11.1.0-x86_64-3_SBo: C++ wrappers for SIMD intrinsics ............ [ 1.2M]
python3-gast-0.5.4-x86_64-3_SBo: AST that abstracts the underlying Pytho [ 200K]
python3-beniget-0.4.1-x86_64-7_SBo: static analyzer for Python code .... [ 100K]
python3-flit_scm-1.7.0-x86_64-7_SBo: PEP 518 build backend library for S [  30K]
python3-exceptiongroup-1.1.3-x86_64-1_SBo: Backport of PEP 654 exception [ 140K]
python3-editables-0.5-x86_64-2_SBo: A Python library for creating editab [  50K]
python3-pathspec-0.11.2-x86_64-2_SBo: Library for gitignore style matchi [ 250K]
python3-pluggy-1.3.0-x86_64-2_SBo: mechanisms for python ............... [ 160K]
python3-calver-2022.6.26-x86_64-8_SBo: setuptools extension for CalVer p [  60K]
python3-trove-classifiers-2023.9.19-x86_64-1_SBo: Canonical source for c [ 160K]
python3-hatchling-1.18.0-x86_64-4_SBo: Hatch build backend ............. [ 940K]
python3-hatch_vcs-0.3.0-x86_64-12_SBo: Hatch plugin for versioning with  [  80K]
python3-iniconfig-2.0.0-x86_64-3_SBo: ini file parsing ................. [  60K]
python3-pytest-7.4.2-x86_64-2_SBo: simple powerful testing with Python . [ 2.2M]
python3-pytest-runner-6.0.0-x86_64-17_SBo: invoke py.test as a distutils [  70K]
python3-pythran-0.13.1-x86_64-8_SBo: Ahead of Time compiler for numeric  [ 5.6M]
Running python3-scipy.SlackBuild ...                                ETA 04:53:??
env MAKEFLAGS='-j24 -l13' nice -n 5 bash ./python3-scipy.SlackBuild
Build time 194 sec, peak load 13.30, peak memory 3099M, peak tmp 427M
Built ok:  python3-scipy-1.11.3-x86_64-2_SBo.txz                        04:53:28
Testing package python3-scipy-1.11.3-x86_64-2_SBo.txz ... done.
Test installing python3-scipy-1.11.3-x86_64-2_SBo.txz ...
python3-scipy-1.11.3-x86_64-2_SBo: python library for math, science, and [  94M]
Unmounting chroot ... done.
Backed up: python3-scipy-1.11.3-x86_64-1_SBo.txz
✅ academic/python3-scipy Updated for git 4af055f ✅

================================================================================
SUMMARY                                                                 04:53:34
================================================================================

Logfile:     /var/log/repo/SBo/repo_2023-10-15_04:50:02.log
Runtime:     0h 3m 32s
Updated:     1
  academic/python3-scipy/python3-scipy-1.11.3-x86_64-2_SBo.txz

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sbo-bot bot commented Oct 15, 2023

sbopkglint x86_64 academic/python3-scipy

Using tests from /usr/share/sbo-maintainer-tools/sbopkglint.d
Exploding /var/lib/repo/SBo/packages/15.0/x86_64/academic/python3-scipy/python3-scipy-1.11.3-x86_64-2_SBo.txz to /tmp/SBo/sbopkglint.k0T1jR ...OK
Running pre-doinst test...OK
Installing /var/lib/repo/SBo/packages/15.0/x86_64/academic/python3-scipy/python3-scipy-1.11.3-x86_64-2_SBo.txz to /tmp/SBo/sbopkglint.k0T1jR ...OK
Running test: 05-basic-sanity...OK
Running test: 10-docs...OK
Running test: 15-noarch...OK
Running test: 20-arch...OK
Running test: 25-lafiles...OK
Running test: 30-manpages...OK
Running test: 35-desktop...OK
Running test: 40-newconfig...OK
Running test: 45-doinst...OK
Running test: 50-icons...OK
Running test: 60-usr_info...OK
Running test: 65-python...OK
Running test: 70-tmp_path...OK
Running test: 75-static_libs...OK
Running test: 85-perl...OK
=== python3-scipy-1.11.3-x86_64-2_SBo.txz: All tests passed✅

@willysr
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willysr commented Oct 15, 2023

@bassmadrigal please push it to your branch
i will mark this issue solved

@willysr willysr closed this Oct 15, 2023
@willysr willysr deleted the python3-scipy-fixups branch October 15, 2023 08:04
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3 participants