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Implement GFIX preprocessing #2178

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alejoe91 opened this issue Nov 7, 2023 · 3 comments
Open

Implement GFIX preprocessing #2178

alejoe91 opened this issue Nov 7, 2023 · 3 comments
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enhancement New feature or request preprocessing Related to preprocessing module

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@alejoe91
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alejoe91 commented Nov 7, 2023

From https://billkarsh.github.io/SpikeGLX/help/catgt_tshift/catgt_tshift/:

"-gfix=0.40,0.10,0.02. This requires that a transient artifact must attain a peak amplitude of at least ||0.40 mV||, must reach its peak as least as rapidly as ||0.1mV/sample-tick||, and the transient is over when the amplitude settles back to ||0.02 mV|| or smaller"

@alejoe91 alejoe91 added enhancement New feature or request preprocessing Related to preprocessing module labels Nov 7, 2023
@alejoe91 alejoe91 self-assigned this Nov 7, 2023
@WeissShahaf
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any news on implementing GFIX?
it's a great tool and the only thing missing for switching from catGT functionality in spikeinterface

@alejoe91
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@WeissShahaf we are holgin a hackahton at th end of the month. I'll put this in as a project ;)

@alejoe91
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Labels
enhancement New feature or request preprocessing Related to preprocessing module
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