To import code, generate a virtual environment. By using conda:
conda create -n ml-covid python=3.9
Cloning repository:
git clone https://github.com/u-genoma/CovidModels.git
Go to repository folder and install requirements on virtual environment
cd CovidModels
conda activate ml-covid
pip install -r requirenments.txt
And install the repository as develop, in case changes are needed:
cd code
python setup.py develop
cd ..