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Version bumped 0.99.9
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TanerArslan committed Mar 27, 2019
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Package: SubCellBarCode
Type: Package
Title: SubCellBarCode: Integrated workflow for robust mapping and visualizing whole human spatial proteome
Version: 0.99.8
Version: 0.99.9
Author: Taner Arslan
Maintainer: Taner Arslan <taner.arslan@ki.se>
Description: Mass-Spectrometry based spatial proteomics have enabled the proteome-wide mapping of protein subcellular localization (Orre et al. 2019, Molecular Cell). SubCellBarCode R package robustly classifies proteins into corresponding subcellular localization.
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8 changes: 4 additions & 4 deletions vignettes/SubCellBarCode.Rmd
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Expand Up @@ -320,10 +320,10 @@ SubCellBarCode. It is in `data.frame` format;
head(hcc827CtrlPSMCount)
```

```{r plotbarcode, fig.width = 6, fig.height = 6}
plotBarcode(sampleClassification = cls.df, protein = "TP53",
s1PSM = hcc827CtrlPSMCount)
```
#```{r plotbarcode, fig.width = 6, fig.height = 6}
#plotBarcode(sampleClassification = cls.df, protein = "TP53",
# s1PSM = hcc827CtrlPSMCount)
#```

## Co-localization plot
To evaluate localization and of multiple proteins at
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