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Working from home
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  • Vrije University Amsterdam
  • Amsterdam, The Netherlands

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Pinned

  1. scRamble scRamble Public

    In order to address the concerns regarding the privacy of genetic data and the need to perform genotype imputation relying on a server that is located in the United States, we have developed a pipe…

    R

  2. AnnotateMe AnnotateMe Public

    AnnotateMe is an annotation framework for single nucleotide polymorphisms. Can be used to annotate genetic variants to likely affected genes and to perform gene-set overlap analysis of the associat…

  3. Disentangle_AD_Age Disentangle_AD_Age Public

    Script for the analysis of the imbalance effect direction between Alzheimer's disease and cognitively healthy aging

    R

  4. pacbio_pipeline pacbio_pipeline Public

    Forked from mhulsman/pacbio_pipeline

    Python

  5. pathway-PRS pathway-PRS Public

    Pipeline to perform annotation of variants to a pre-selected set of pathways and then calculate and associate pathway-specific Polygenic Risk Scores (PRS) and typical PRS.

    R 2

  6. snpXplorer snpXplorer Public

    SNPbrowser is project written in python to display results from Genome-Wide Association Studies (GWAS) with a wide range of possibilities, including overlap of multiple studies.

    R 7 2