Seed RNG in clustering algorithms #73
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Documentation | |
| on: [push, pull_request] | |
| jobs: | |
| MakeDocs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2-branch | |
| with: | |
| r-version: '4.1.0' | |
| - name: Create Documentation directory | |
| run: | | |
| echo "Creating 'Documentation'" | |
| mkdir -p Documentation | |
| - name: Install knitr dependency | |
| run: | | |
| echo "Installing R package dependencies. Scripts might have additional dependencies installed." | |
| Rscript -e 'if (!require(knitr)) install.packages("knitr")' | |
| - name: Documentation compilation | |
| run: | | |
| Rscript -e ' | |
| cat("R process started.\n") | |
| cat("Change working directory to documentation directory\n") | |
| setwd("Documentation") | |
| cat("Creating the directory list\n") | |
| dirlist <- c("../Association-Algorithms", | |
| "../Classification-Algorithms", | |
| "../Clustering-Algorithms", | |
| "../Data-Manipulation", | |
| "../Data-Mining", | |
| "../Data-Preprocessing", | |
| "../Machine-Learning", | |
| "../Mathematics", | |
| "../Regression-Algorithms", | |
| "../Sorting-Algorithms") | |
| print(dirlist) | |
| cat("Getting a list of R scripts from the algorithm directories.\n") | |
| scriptlist <- lapply(dirlist, list.files, ".R", full.names = TRUE) | |
| cat("Removing from the list empty directories.\n") | |
| scriptlist <- scriptlist[!sapply(scriptlist, identical, character(0))] | |
| print(unlist(scriptlist)) | |
| cat("Compiling documentation from scripts.\n") | |
| invisible(lapply(unlist(scriptlist), function(x) tryCatch(knitr::spin(x), | |
| error = function(e) message("Error compiling: ", x)))) | |
| cat("R process done.\n") | |
| ' | |
| - name: Commit Documentation | |
| run: | | |
| git diff-index --quiet HEAD && exit | |
| echo "Setting up Git to push changes." | |
| git config --global user.name 'autoprettier' | |
| git config --global user.email 'actions@github.com' | |
| git remote set-url origin https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY | |
| echo "Staging documentation" | |
| git add Documentation/ # This is the only directory that has changes and should be staged | |
| git commit -m "Update documentation" | |
| git push || true |