Update documentation_workflow.yml #145

	name: Documentation
	on: [push, pull_request]

	jobs:
	MakeDocs:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v3
	- name: Setup R
	uses: r-lib/actions/setup-r@v2-branch
	with:
	r-version: '4.1.0'
	- name: Create Documentation directory
	run: \|
	echo "Creating 'Documentation'"
	mkdir -p documentation
	- name: Install dependencies
	run: \|
	echo "Installing R package dependencies. Scripts might have additional dependencies installed."
	Rscript -e 'if (!require(knitr)) install.packages("knitr")'
	Rscript -e 'if (!require(markdown)) install.packages("markdown")'
	- name: Remove old documentation
	run: 'rm -rf documentation/*'
	- name: Generate new documentation
	run: 'Rscript .github/scripts/doc_builder.r'
	- name: Commit Documentation
	run: \|
	git diff-index --quiet HEAD && exit
	echo "Setting up Git to push changes."
	git config --global user.name 'autoprettier'
	git config --global user.email 'actions@github.com'
	git remote set-url origin https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY
	echo "Staging documentation"
	git add documentation/ # This is the only directory that has changes and should be staged
	git commit -m "Update documentation" \|\| true
	git push \|\| true

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