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The Jackson Laboratory

The Jackson Laboratory: Leading the search for tomorrow's cures.

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Repositories

113 results for all repositories written in Python sorted by last updated
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Showing 10 of 113 repositories
  • geneweaver-db Public

    The GeneWeaver database interaction code.

    Python 2 Apache-2.0 0 0 2 Updated May 23, 2024
  • DccXmlGenerator Public

    This is the Python version of the DCC XML file generator.

    Python 0 0 0 0 Updated May 19, 2024
  • geneweaver-api Public

    A system for the integration and analysis of heterogeneous functional genomics data.

    Python 1 Apache-2.0 0 0 1 Updated May 17, 2024
  • STQ Public

    Spatial Transcriptomics Quantification pipeline for 10x Visium and H&E-stained whole slide images

    Python 10 MIT 0 1 0 Updated May 15, 2024
  • ezomero Public

    A module with convenience functions for writing Python code that interacts with OMERO.

    Python 32 GPL-2.0 10 3 2 Updated May 11, 2024
  • zarrdataset Public

    A dataset for loading zarr files to be used in machine learning training pipelines

    Python 14 MIT 1 0 0 Updated May 10, 2024
  • dask_relabeling Public

    A relabeling tool for tiled segmentation with Dask

    Python 8 MIT 1 2 1 Updated May 9, 2024
  • geneweaver-client Public

    A client library for the integration and analysis of heterogeneous functional genomics data.

    Python 3 Apache-2.0 0 0 0 Updated May 9, 2024
  • scbl-utils Public

    A set of command-line utilities that facilitates data processing in the Single Cell Biology Lab at the Jackson Laboratory.

    Python 3 MIT 0 2 0 Updated May 6, 2024
  • activelearning Public

    Active learning tools for fine-tuning ML models

    Python 0 MIT 0 0 0 Updated Apr 29, 2024
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