Error import theano in SUSE #6666
Comments
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It seems like the headers that are installed for C++ are broken. Can you test if you are able to compile this program:
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#include <Python.h>
#include <math.h>
int main() { return 0; }
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Arnaud
Le 11 déc. 2018 à 05:00, L619 ***@***.***> a écrit :
I install theano without error(only use naked python,without conda), but when I use the command "import theano", there is an error as following. Could you please fix it? Thank you.
My linux system is:
NAME="SLES"
VERSION="12-SP2"
VERSION_ID="12.2"
PRETTY_NAME="SUSE Linux Enterprise Server 12 SP2"
The python version is 3.6.7
import theano
You can find the C code in this temporary file: /tmp/theano_compilation_error_w72urbne
library inux/7/include-fixed/limits.h:194, is not found.
library inux/7/include-fixed/syslimits.h:7, is not found.
library inux/7/include-fixed/limits.h:34, is not found.
library inux/7/include-fixed/limits.h:194, is not found.
library inux/7/include-fixed/syslimits.h:7, is not found.
library inux/7/include-fixed/limits.h:34, is not found.
Traceback (most recent call last):
File "/opt/python3/lib/python3.6/site-packages/theano/gof/lazylinker_c.py", line 81, in
actual_version, force_compile, _need_reload))
ImportError: Version check of the existing lazylinker compiled file. Looking for version 0.211, but found None. Extra debug information: force_compile=False, _need_reload=True
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/opt/python3/lib/python3.6/site-packages/theano/gof/lazylinker_c.py", line 105, in
actual_version, force_compile, _need_reload))
ImportError: Version check of the existing lazylinker compiled file. Looking for version 0.211, but found None. Extra debug information: force_compile=False, _need_reload=True
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "", line 1, in
File "/opt/python3/lib/python3.6/site-packages/theano/init.py", line 110, in
from theano.compile import (
File "/opt/python3/lib/python3.6/site-packages/theano/compile/init.py", line 12, in
from theano.compile.mode import *
File "/opt/python3/lib/python3.6/site-packages/theano/compile/mode.py", line 11, in
import theano.gof.vm
File "/opt/python3/lib/python3.6/site-packages/theano/gof/vm.py", line 674, in
from . import lazylinker_c
File "/opt/python3/lib/python3.6/site-packages/theano/gof/lazylinker_c.py", line 140, in
preargs=args)
File "/opt/python3/lib/python3.6/site-packages/theano/gof/cmodule.py", line 2388, in compile_str
(status, compile_stderr.replace('\n', '. ')))
Exception: Compilation failed (return status=1): In file included from /opt/python3/include/python3.6m/pyport.h:194:0,. from /opt/python3/include/python3.6m/Python.h:53,. from /root/.theano/compiledir_Linux-4.4--default-x86_64-with-SuSE-12-x86_64-x86_64-3.6.7-64/lazylinker_ext/mod.cpp:1:. /usr/include/c++/7/math.h:65:12: error: ‘constexpr bool std::isinf(double)’ conflicts with a previous declaration. using std::isinf;. ^~~~~. In file included from /usr/include/features.h:347:0,. from /usr/include/limits.h:27,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/limits.h:194,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/syslimits.h:7,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/limits.h:34,. from /opt/python3/include/python3.6m/Python.h:11,. from /root/.theano/compiledir_Linux-4.4--default-x86_64-with-SuSE-12-x86_64-x86_64-3.6.7-64/lazylinker_ext/mod.cpp:1:. /usr/include/bits/mathcalls.h:202:1: note: previous declaration ‘int isinf(double)’. __MATHDECL_1 (int,isinf,, (Mdouble __value)) attribute ((const));. ^. In file included from /opt/python3/include/python3.6m/pyport.h:194:0,. from /opt/python3/include/python3.6m/Python.h:53,. from /root/.theano/compiledir_Linux-4.4--default-x86_64-with-SuSE-12-x86_64-x86_64-3.6.7-64/lazylinker_ext/mod.cpp:1:. /usr/include/c++/7/math.h:66:12: error: ‘constexpr bool std::isnan(double)’ conflicts with a previous declaration. using std::isnan;. ^~~~~. In file included from /usr/include/features.h:347:0,. from /usr/include/limits.h:27,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/limits.h:194,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/syslimits.h:7,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/limits.h:34,. from /opt/python3/include/python3.6m/Python.h:11,. from /root/.theano/compiledir_Linux-4.4--default-x86_64-with-SuSE-12-x86_64-x86_64-3.6.7-64/lazylinker_ext/mod.cpp:1:. /usr/include/bits/mathcalls.h:235:1: note: previous declaration ‘int isnan(double)’. __MATHDECL_1 (int,isnan,, (Mdouble __value)) attribute ((const));. ^.
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@abergeron , sorry, I can't see the program. What is the program ? Thank you. "Can you test if you are able to compile this program" |
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I install theano without error(only use naked python,without conda), but when I use the command "import theano", there is an error as following. Could you please fix it? Thank you.
My linux system is:
NAME="SLES"
VERSION="12-SP2"
VERSION_ID="12.2"
PRETTY_NAME="SUSE Linux Enterprise Server 12 SP2"
The python version is 3.6.7
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/opt/python3/lib/python3.6/site-packages/theano/gof/lazylinker_c.py", line 105, in
actual_version, force_compile, _need_reload))
ImportError: Version check of the existing lazylinker compiled file. Looking for version 0.211, but found None. Extra debug information: force_compile=False, _need_reload=True
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "", line 1, in
File "/opt/python3/lib/python3.6/site-packages/theano/init.py", line 110, in
from theano.compile import (
File "/opt/python3/lib/python3.6/site-packages/theano/compile/init.py", line 12, in
from theano.compile.mode import *
File "/opt/python3/lib/python3.6/site-packages/theano/compile/mode.py", line 11, in
import theano.gof.vm
File "/opt/python3/lib/python3.6/site-packages/theano/gof/vm.py", line 674, in
from . import lazylinker_c
File "/opt/python3/lib/python3.6/site-packages/theano/gof/lazylinker_c.py", line 140, in
preargs=args)
File "/opt/python3/lib/python3.6/site-packages/theano/gof/cmodule.py", line 2388, in compile_str
(status, compile_stderr.replace('\n', '. ')))
Exception: Compilation failed (return status=1): In file included from /opt/python3/include/python3.6m/pyport.h:194:0,. from /opt/python3/include/python3.6m/Python.h:53,. from /root/.theano/compiledir_Linux-4.4--default-x86_64-with-SuSE-12-x86_64-x86_64-3.6.7-64/lazylinker_ext/mod.cpp:1:. /usr/include/c++/7/math.h:65:12: error: ‘constexpr bool std::isinf(double)’ conflicts with a previous declaration. using std::isinf;. ^~~~~. In file included from /usr/include/features.h:347:0,. from /usr/include/limits.h:27,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/limits.h:194,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/syslimits.h:7,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/limits.h:34,. from /opt/python3/include/python3.6m/Python.h:11,. from /root/.theano/compiledir_Linux-4.4--default-x86_64-with-SuSE-12-x86_64-x86_64-3.6.7-64/lazylinker_ext/mod.cpp:1:. /usr/include/bits/mathcalls.h:202:1: note: previous declaration ‘int isinf(double)’. __MATHDECL_1 (int,isinf,, (Mdouble __value)) attribute ((const));. ^. In file included from /opt/python3/include/python3.6m/pyport.h:194:0,. from /opt/python3/include/python3.6m/Python.h:53,. from /root/.theano/compiledir_Linux-4.4--default-x86_64-with-SuSE-12-x86_64-x86_64-3.6.7-64/lazylinker_ext/mod.cpp:1:. /usr/include/c++/7/math.h:66:12: error: ‘constexpr bool std::isnan(double)’ conflicts with a previous declaration. using std::isnan;. ^~~~~. In file included from /usr/include/features.h:347:0,. from /usr/include/limits.h:27,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/limits.h:194,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/syslimits.h:7,. from /usr/lib64/gcc/x86_64-suse-linux/7/include-fixed/limits.h:34,. from /opt/python3/include/python3.6m/Python.h:11,. from /root/.theano/compiledir_Linux-4.4--default-x86_64-with-SuSE-12-x86_64-x86_64-3.6.7-64/lazylinker_ext/mod.cpp:1:. /usr/include/bits/mathcalls.h:235:1: note: previous declaration ‘int isnan(double)’. __MATHDECL_1 (int,isnan,, (Mdouble __value)) attribute ((const));. ^.
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