update UniverSC module to restructured repo

nf-core#2141 remove files for restructed UniverSC module (avoids duplicate tests)
TomKellyGenetics · Oct 11, 2022 · f79f671 · f79f671
1 parent acc3ae5
commit f79f671
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Showing 11 changed files with 4 additions and 4 deletions.
diff --git a/modules/universc/CITATION.cff → modules/nf-core/universc/CITATION.cff b/modules/universc/CITATION.cff → modules/nf-core/universc/CITATION.cff
diff --git a/modules/universc/CITATION.md → modules/nf-core/universc/CITATION.md b/modules/universc/CITATION.md → modules/nf-core/universc/CITATION.md
diff --git a/modules/universc/Dockerfile → modules/nf-core/universc/Dockerfile b/modules/universc/Dockerfile → modules/nf-core/universc/Dockerfile
diff --git a/modules/universc/Dockerfile.cellranger_clean → ...core/universc/Dockerfile.cellranger_clean b/modules/universc/Dockerfile.cellranger_clean → ...core/universc/Dockerfile.cellranger_clean
diff --git a/modules/universc/Dockerfile.universc → modules/nf-core/universc/Dockerfile.universc b/modules/universc/Dockerfile.universc → modules/nf-core/universc/Dockerfile.universc
diff --git a/modules/universc/README.md → modules/nf-core/universc/README.md b/modules/universc/README.md → modules/nf-core/universc/README.md
diff --git a/modules/universc/main.nf → modules/nf-core/universc/main.nf b/modules/universc/main.nf → modules/nf-core/universc/main.nf
diff --git a/modules/universc/meta.yml → modules/nf-core/universc/meta.yml b/modules/universc/meta.yml → modules/nf-core/universc/meta.yml
diff --git a/tests/modules/universc/main.nf → tests/modules/nf-core/universc/main.nf b/tests/modules/universc/main.nf → tests/modules/nf-core/universc/main.nf
@@ -2,10 +2,10 @@
 
 nextflow.enable.dsl = 2
 
-include { CELLRANGER_MKGTF } from '../../../modules/cellranger/mkgtf/main.nf'
-include { CELLRANGER_MKREF } from '../../../modules/cellranger/mkref/main.nf'
-include { CELLRANGER_COUNT_OS } from '../../../modules/universc/main.nf'
-include { UNIVERSC } from '../../../modules/universc/main.nf'
+include { CELLRANGER_MKGTF } from '../../../../modules/nf-core/cellranger/mkgtf/main.nf'
+include { CELLRANGER_MKREF } from '../../../../modules/nf-core/cellranger/mkref/main.nf'
+include { CELLRANGER_COUNT_OS } from '../../../../modules/nf-core/universc/main.nf'
+include { UNIVERSC } from '../../../../modules/nf-core/universc/main.nf'
 
 workflow test_cellranger_10x {
 

diff --git a/tests/modules/universc/nextflow.config → .../modules/nf-core/universc/nextflow.config b/tests/modules/universc/nextflow.config → .../modules/nf-core/universc/nextflow.config
diff --git a/tests/modules/universc/test.yml → tests/modules/nf-core/universc/test.yml b/tests/modules/universc/test.yml → tests/modules/nf-core/universc/test.yml