CI: bump workflows, fix tests

TomographicImaging · May 1, 2024 · 422fc13 · 422fc13
1 parent 53f145c
commit 422fc13
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Showing 3 changed files with 19 additions and 20 deletions.
diff --git a/.github/workflows/conda_build_and_publish.yml b/.github/workflows/conda_build_and_publish.yml
@@ -1,5 +1,4 @@
-name: conda_build
-
+name: conda
 on:
   release:
     types: [published]
@@ -9,19 +8,24 @@ on:
       - '**'
   pull_request:
     branches: [ master ]
-
 jobs:
   build:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v1
+    - uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+        ref: ${{ github.event.pull_request.head.sha || github.ref }} # fix SHA
+    - name: install dependencies
+      run: |
+        # required for VTK
+        sudo apt-get update -qq
+        sudo apt-get install -yqq libosmesa6-dev
     - name: publish-to-conda
-      uses: paskino/conda-package-publish-action@v1.4.4
+      uses: TomographicImaging/conda-package-publish-action@v2
       with:
-        subDir: 'recipe'
+        subDir: recipe
         channels: '-c conda-forge -c ccpi -c paskino'
         AnacondaToken: ${{ secrets.ANACONDA_TOKEN }}
         publish: ${{ github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags') }}
         test_all: ${{(github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')) || (github.ref == 'refs/heads/master')}}
-        convert_win: false
-        convert_osx: false
diff --git a/.github/workflows/docs_build_and_publish.yml b/.github/workflows/docs_build_and_publish.yml
@@ -1,3 +1,4 @@
+name: docs
 on:
   release:
     types: [published]
@@ -13,13 +14,13 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v1
+    - uses: actions/checkout@v4
     - uses: ammaraskar/sphinx-action@master
       with:
         docs-folder: "docs/"
         pre-build-command: python -m pip install --upgrade pip; pip install sphinx_rtd_theme
     # Create an artifact of the html output.
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: DocumentationHTML
         path: docs/build/html/
@@ -30,7 +31,7 @@ jobs:
     if: github.ref == 'refs/heads/master'
     steps:
     - name: Download artifact of the html output.
-      uses: actions/download-artifact@v2
+      uses: actions/download-artifact@v4
       with:
         name: DocumentationHTML
         path: docs/build/html/

diff --git a/recipe/meta.yaml b/recipe/meta.yaml
@@ -6,13 +6,11 @@ source:
   path: ../
 
 build:
-  number: {{ GIT_DESCRIBE_NUMBER }}
+  number: {{ environ.get('GIT_DESCRIBE_NUMBER', 0) }}
   noarch: python
   preserve_egg_dir: False
-
   entry_points:
     - idvc = idvc.idvc:main
-
   missing_dso_whitelist:
     - /lib64/libc.so.6            # [linux]
     - /lib64/libm.so.6            # [linux]
@@ -23,22 +21,18 @@ build:
     - C:\Windows\System32\msvcrt.dll   # [win]
     - C:\Windows\System32\SHELL32.dll  # [win]
 
-
 test:
   source_files:
     - ./test
-
   commands:
-    - python -c "import os; print ('TESTING IN THIS DIRECTORY' , os.getcwd())"
+    - python -c "import os; print('TESTING IN THIS DIRECTORY', os.getcwd())"
     - python -m unittest discover test
-  
+
 requirements:
-
   build:
     - python
     - numpy
     - typing_extensions # [py<=37]
-
   run:
     - python
     - numpy