Fixed bug in leftover synonym generation.

TranslatorSRI · May 5, 2023 · 83e83c7 · 83e83c7
1 parent 2681beb
commit 83e83c7
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/createcompendia/leftover_umls.py b/src/createcompendia/leftover_umls.py
@@ -193,7 +193,7 @@ def umls_type_to_biolink_type(umls_tui):
                 id, relation, synonym = line.rstrip().split('\t')
                 if id in umls_ids_in_this_compendium:
                     # Add this synonym to the set of synonyms for this identifier.
-                    if id not in synonyms:
+                    if id not in synonyms_by_id:
                         synonyms_by_id[id] = set()
                     synonyms_by_id[id].add(synonym)