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@TravisWheelerLab

Wheeler Lab

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  1. nail nail Public

    Nail is an Alignment Inference tooL

    Rust 26 2

  2. BATH BATH Public

    Better Alignments with Translated HMMER

    C 13 2

  3. AvxWindowFmIndex AvxWindowFmIndex Public

    A fast, AVX2 and ARM Neon accelerated FM index library

    C 27 2

  4. ULTRA ULTRA Public

    ULTRA Locates Tandemly Repetitive Areas

    C++ 22 3

  5. DIPLOMAT DIPLOMAT Public

    Deep learning-based Identity Preserving Labeled-Object Multi-Animal Tracking (Beta)

    Python 6 2

  6. NEAR NEAR Public

    Makefile 2

Repositories

Showing 10 of 53 repositories
  • sculu-rs Public

    Rust implementation of SCULU (Subfamily Clustering Using Label Uncertainty)

    TravisWheelerLab/sculu-rs’s past year of commit activity
    Python 1 BSD-3-Clause 0 0 0 Updated Jul 3, 2024
  • nail Public

    Nail is an Alignment Inference tooL

    TravisWheelerLab/nail’s past year of commit activity
    Rust 26 BSD-3-Clause 2 0 1 Updated Jul 2, 2024
  • BATH Public

    Better Alignments with Translated HMMER

    TravisWheelerLab/BATH’s past year of commit activity
    C 13 2 1 0 Updated Jun 29, 2024
  • tallyman Public

    Tallyman helps you count sequence occurrences

    TravisWheelerLab/tallyman’s past year of commit activity
    Jupyter Notebook 0 1 14 6 Updated Jun 28, 2024
  • DIPLOMAT Public

    Deep learning-based Identity Preserving Labeled-Object Multi-Animal Tracking (Beta)

    TravisWheelerLab/DIPLOMAT’s past year of commit activity
    Python 6 BSD-3-Clause 2 3 0 Updated Jun 26, 2024
  • easel Public Forked from EddyRivasLab/easel

    Sequence analysis library used by Eddy/Rivas lab code

    TravisWheelerLab/easel’s past year of commit activity
    C 0 26 0 0 Updated Jun 25, 2024
  • nail-benchmarks Public

    A collection of reproducible benchmarks for nail

    TravisWheelerLab/nail-benchmarks’s past year of commit activity
    Python 0 0 0 0 Updated Jun 10, 2024
  • ULTRA Public

    ULTRA Locates Tandemly Repetitive Areas

    TravisWheelerLab/ULTRA’s past year of commit activity
    C++ 22 BSD-3-Clause 3 4 0 Updated Jun 4, 2024
  • atlas_md_download Public

    Download MD from https://www.dsimb.inserm.fr/ATLAS/index.html

    TravisWheelerLab/atlas_md_download’s past year of commit activity
    Python 0 0 0 0 Updated May 14, 2024
  • trans-hmmer Public archive Forked from EddyRivasLab/hmmer

    Fork of HMMER, containing translated search variants: hmmsearcht and hmmscant

    TravisWheelerLab/trans-hmmer’s past year of commit activity
    C 1 70 0 0 Updated May 9, 2024
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