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Plot for samples not working in SDE example #420

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bonStats opened this issue Sep 1, 2023 · 1 comment · May be fixed by #446
Closed

Plot for samples not working in SDE example #420

bonStats opened this issue Sep 1, 2023 · 1 comment · May be fixed by #446

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@bonStats
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bonStats commented Sep 1, 2023

See code below located: https://turinglang.org/v0.28/tutorials/10-bayesian-differential-equations/#inference-of-a-stochastic-differential-equation
and resulting output

model_sde = fitlv_sde(odedata, prob_sde)

setadbackend(:forwarddiff)
chain_sde = sample(
    model_sde,
    NUTS(0.25),
    5000;
    init_params=[1.5, 1.3, 1.2, 2.7, 1.2, 0.12, 0.12],
    progress=false,
)
plot(chain_sde)

@yebai
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yebai commented May 25, 2024

This is likely due to incorrect inference results observed in TuringLang/Turing.jl#2216 instead of a plotting issue.

@yebai yebai closed this as completed May 25, 2024
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