Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Upload DICOM images with FTPS #226

Merged
merged 45 commits into from
Jan 23, 2024
Merged

Upload DICOM images with FTPS #226

merged 45 commits into from
Jan 23, 2024

Conversation

milanmlft
Copy link
Member

@milanmlft milanmlft commented Jan 16, 2024

  • Adds upload_dicom_image() in pixl_core to export DICOM images over FTPS to the DSH
  • DICOM images are exported as a .zip file to <project_slug>/<pseudo_anon_identifier>.zip
  • Adds a test FTP server Docker container to mock an FTPS server for testing

Fixes #190

@milanmlft milanmlft marked this pull request as ready for review January 22, 2024 17:27
Copy link
Contributor

@stefpiatek stefpiatek left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Looking good. Need to make some changes for it to work in production

orthanc/orthanc-anon/plugin/pixl.py Outdated Show resolved Hide resolved
orthanc/orthanc-anon/plugin/pixl.py Outdated Show resolved Hide resolved
pixl_core/src/core/_database.py Outdated Show resolved Hide resolved
pixl_core/src/core/_database.py Outdated Show resolved Hide resolved
pixl_core/src/core/upload.py Outdated Show resolved Hide resolved
pixl_core/tests/conftest.py Outdated Show resolved Hide resolved
pixl_core/tests/conftest.py Outdated Show resolved Hide resolved
pixl_core/tests/conftest.py Outdated Show resolved Hide resolved
pixl_core/tests/conftest.py Outdated Show resolved Hide resolved
pixl_core/tests/test_upload.py Outdated Show resolved Hide resolved
Copy link
Contributor

@stefpiatek stefpiatek left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks for getting this in 🎉

Happy for you to merge, some small suggestions remaining I think

orthanc/orthanc-anon/plugin/pixl.py Outdated Show resolved Hide resolved
@milanmlft milanmlft enabled auto-merge (squash) January 23, 2024 17:00
@milanmlft milanmlft merged commit f204c5e into main Jan 23, 2024
8 checks passed
@milanmlft milanmlft deleted the stef/image-upload-sftp branch January 23, 2024 17:05
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Export DICOM images via FTPS
3 participants