Supplementary materials for cath-tools
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cath-cluster-voronoi
cath-resolve-hits-paper-materials
cath-resolve-hits.performance_benchmark
delta_pdb_reduce
generate_changelog
homologue_discrimination_benchmark
notes
old_confidentiality_agreement
old_release_notes
pymol_useful_commands
regression_test
LICENSE
README.md

README.md

cath-tools-supplementary

Supplementary materials for cath-tools

Overview of contents

Directories:

  • cath-resolve-hits.performance_benchmark Materials for benchmarking cath-resolve-hits
  • delta_pdb_reduce A script for reducing test PDBs
  • generate_changelog A simple script for generating a changelog file for cath-tools from the release history via the Git API
  • homologue_discrimination_benchmark A simple benchmark of homologue-discrimination (generates 3 plots: scatter, ROC & precision-recall)
  • notes Some notes on the development of cath-tools
  • old_confidentiality_agreement The confidentially agreement that used to be used to distribute SSAP
  • old_release_notes The release notes that used to accompany SSAP
  • pymol_useful_commands Some PyMOL commands that have been found useful whilst developing cath-tools
  • regression_test A simple regression check that diffs the output over 120 pairs that provide a good coverage of SSAP scores

Files:

  • LICENSE The license associated with this project
  • README.md This README.md document