Skip to content

Commit

Permalink
Add new test for gluing SSAP alignments
Browse files Browse the repository at this point in the history
  • Loading branch information
tonyelewis committed Aug 5, 2015
1 parent 24d7862 commit 74612c4
Show file tree
Hide file tree
Showing 8 changed files with 2,692 additions and 2 deletions.
862 changes: 862 additions & 0 deletions build-test-data/ssap_scores_alignment_gluing/1o7iB00

Large diffs are not rendered by default.

121 changes: 121 additions & 0 deletions build-test-data/ssap_scores_alignment_gluing/1o7iB003uljB00.list
Original file line number Diff line number Diff line change
@@ -0,0 +1,121 @@
1 0 0 M 0 0 0 0 0
2 0 0 E 0 0 0 0 0
3 0 0 E 0 0 0 0 0
4 0 0 K 0 0 0 0 0
5 0 0 V 0 0 0 0 0
6 0 0 G 0 0 0 0 0
7 0 0 N 0 0 0 0 0
8 0 0 L 0 0 0 0 0
9 0 0 K 0 0 0 0 0
10 0 0 P 0 G 0 0 25
11 0 0 N 0 D 0 0 27
12 0 0 M 6 P 0 0 28
13 0 0 E 5 Q 0 0 29
14 0 0 S 8 V 0 0 30
15 S 0 V 13 L 0 0 31
16 S 0 N 12 R 0 0 32
17 S 0 V 13 G 0 0 33
18 S 0 T 0 0 0 0 0
19 S 0 V 19 G 0 0 35
20 S 0 R 24 H 0 0 36
21 S 0 V 25 C 0 0 37
22 S 0 L 25 K 0 0 38
23 S 0 E 18 W 0 S 39
24 0 0 A 21 F 0 S 40
25 0 0 S 16 N 0 S 41
26 0 0 E 7 V 0 S 42
27 0 0 A 9 M 0 S 44
28 S 0 R 0 0 0 0 0
29 S 0 Q 0 0 0 0 0
30 S 0 I 0 0 0 0 0
31 S 0 Q 0 0 0 0 0
32 0 0 T 0 0 0 0 0
33 0 0 K 0 0 0 0 0
34 0 0 N 0 0 0 0 0
35 0 0 G 0 0 0 0 0
36 0 0 V 0 0 0 0 0
37 S 0 R 0 0 0 0 0
38 S 0 T 22 G 0 0 45
39 S 0 I 32 F 0 0 46
40 S 0 S 31 G 0 0 47
41 S 0 E 36 F 0 0 48
42 S 0 A 32 I 0 S 49
43 S 0 I 28 S 0 S 50
44 S 0 V 32 M 0 S 51
45 S 0 G 18 T 0 S 52
0 0 0 0 0 E 0 S 55
0 0 0 0 0 G 0 S 56
0 0 0 0 0 S 0 0 57
46 S 0 D 7 P 0 0 58
47 0 0 E 1 L 0 0 59
48 0 0 T 6 E 0 0 60
49 S 0 G 11 N 0 0 61
50 S 0 R 18 P 0 0 62
51 S 0 V 26 V 0 0 63
52 S 0 K 34 D 0 0 64
53 S 0 L 38 V 0 0 65
54 S 0 T 38 F 0 0 66
55 S 0 L 33 V 0 0 67
56 S 0 W 25 H 0 S 68
57 0 0 G 9 Q 0 S 69
58 0 0 K 15 S 0 S 70
59 0 0 H 21 K 0 S 71
0 0 0 0 0 L 0 S 72
0 0 0 0 0 Y 0 S 73
0 0 0 0 0 M 0 0 74
0 0 0 0 0 G 0 0 76
60 0 0 A 3 F 0 0 77
61 0 0 G 5 R 0 0 78
62 0 0 S 11 S 0 0 79
63 0 0 I 16 L 0 0 80
64 0 0 K 13 K 0 0 81
65 0 0 E 15 E 0 0 82
66 0 0 G 16 G 0 0 83
67 0 0 Q 19 E 0 0 84
68 S 0 V 21 P 0 0 85
69 S 0 V 17 V 0 0 86
70 S 0 K 13 E 0 0 87
71 S 0 I 12 F 0 0 88
72 S 0 E 0 0 0 0 0
73 S 0 N 0 0 0 0 0
74 S 0 A 12 F 0 0 90
75 S 0 W 10 K 0 0 91
76 S 0 T 0 0 0 0 0
77 S 0 T 0 0 0 0 0
78 S 0 A 0 0 0 0 0
79 S 0 F 10 S 0 0 93
80 0 0 K 14 S 0 0 94
81 0 0 G 0 K 0 0 95
82 S 0 Q 0 0 0 0 0
83 S 0 V 0 0 0 0 0
84 S 0 Q 24 G 0 0 96
85 S 0 L 26 F 0 0 97
86 S 0 N 27 E 0 0 98
87 S 0 A 27 S 0 0 99
88 0 0 G 0 0 0 0 0
89 0 0 S 0 0 0 0 0
90 0 0 K 0 0 0 0 0
91 0 0 T 0 0 0 0 0
92 S 0 K 7 R 0 0 101
93 S 0 I 10 V 0 0 102
94 S 0 A 10 T 0 0 103
95 S 0 E 10 G 0 0 104
96 S 0 A 8 P 0 0 105
97 0 0 S 3 G 0 0 106
98 0 0 E 0 G 0 0 107
99 0 0 D 0 N 0 0 108
100 0 0 G 0 P 0 0 109
101 0 0 F 0 C 0 0 110
102 0 0 P 0 L 0 0 111
103 0 0 E 0 G 0 0 112
104 0 0 S 0 E 0 0 114
105 0 0 S 0 0 0 0 0
106 0 0 Q 0 0 0 0 0
107 0 0 I 0 0 0 0 0
108 0 0 P 0 0 0 0 0
109 0 0 E 0 0 0 0 0
110 0 0 N 0 0 0 0 0
111 0 0 T 0 0 0 0 0
112 0 0 P 0 0 0 0 0
113 0 0 T 0 0 0 0 0
114 0 0 A 0 0 0 0 0
123 changes: 123 additions & 0 deletions build-test-data/ssap_scores_alignment_gluing/1o7iB004gs3A00.list
Original file line number Diff line number Diff line change
@@ -0,0 +1,123 @@
1 0 0 M 0 0 0 0 0
2 0 0 E 0 0 0 0 0
3 0 0 E 0 0 0 0 0
4 0 0 K 0 0 0 0 0
5 0 0 V 0 0 0 0 0
6 0 0 G 0 0 0 0 0
7 0 0 N 0 0 0 0 0
8 0 0 L 0 0 0 0 0
9 0 0 K 0 0 0 0 0
10 0 0 P 0 0 0 0 0
11 0 0 N 2 E 0 0 7
12 0 0 M 1 N 0 0 8
13 0 0 E 31 N 0 0 9
14 0 0 S 36 T 0 0 10
15 S 0 V 45 V 0 S 11
16 S 0 N 48 T 0 S 12
17 S 0 V 53 L 0 S 13
18 S 0 T 60 V 0 S 14
19 S 0 V 53 G 0 S 15
20 S 0 R 64 K 0 S 16
21 S 0 V 67 V 0 0 17
22 S 0 L 62 F 0 0 18
23 S 0 E 61 T 0 0 19
24 0 0 A 36 P 0 0 20
25 0 0 S 13 L 0 0 21
26 0 0 E 19 E 0 0 22
27 0 0 A 35 F 0 S 23
28 S 0 R 21 S 0 S 24
29 S 0 Q 27 H 0 S 25
30 S 0 I 9 E 0 S 26
31 S 0 Q 1 L 0 S 27
32 0 0 T 0 0 0 0 0
33 0 0 K 0 0 0 0 0
34 0 0 N 0 0 0 0 0
35 0 0 G 12 Y 0 0 28
36 0 0 V 10 G 0 0 29
37 S 0 R 23 E 0 S 30
38 S 0 T 46 K 0 S 31
39 S 0 I 54 F 0 S 32
40 S 0 S 61 F 0 S 33
41 S 0 E 63 N 0 S 34
42 S 0 A 67 F 0 S 35
43 S 0 I 64 I 0 S 36
44 S 0 V 66 L 0 S 37
45 S 0 G 52 E 0 S 38
46 S 0 D 41 V 0 S 39
47 0 0 E 41 P 0 S 40
48 0 0 T 32 R 0 0 41
0 0 0 0 0 L 0 0 42
0 0 0 0 0 S 0 0 43
0 0 0 0 0 E 0 0 44
0 0 0 0 0 T 0 0 45
0 0 0 0 0 K 0 S 46
49 S 0 G 44 D 0 S 47
50 S 0 R 48 Y 0 S 48
51 S 0 V 52 L 0 S 49
52 S 0 K 55 P 0 S 50
53 S 0 L 68 I 0 S 51
54 S 0 T 63 T 0 S 52
55 S 0 L 64 I 0 S 53
56 S 0 W 39 S 0 S 54
57 0 0 G 12 N 0 0 55
58 0 0 K 57 R 0 0 56
59 0 0 H 51 L 0 0 57
60 0 0 A 6 F 0 0 58
61 0 0 G 3 E 0 0 59
0 0 0 0 0 G 0 0 60
0 0 0 0 0 M 0 0 61
62 0 0 S 1 N 0 0 62
63 0 0 I 51 L 0 0 63
64 0 0 K 43 E 0 0 64
65 0 0 E 54 V 0 0 65
66 0 0 G 51 G 0 0 66
67 0 0 Q 58 T 0 0 67
68 S 0 V 62 R 0 S 68
69 S 0 V 62 V 0 S 69
70 S 0 K 55 K 0 S 70
71 S 0 I 54 I 0 S 71
72 S 0 E 34 E 0 S 72
73 S 0 N 0 0 0 0 0
74 S 0 A 36 G 0 S 73
75 S 0 W 38 Q 0 S 74
76 S 0 T 37 L 0 S 75
77 S 0 T 36 R 0 S 76
78 S 0 A 28 S 0 S 77
79 S 0 F 19 Y 0 S 78
0 0 0 0 0 N 0 S 79
0 0 0 0 0 R 0 0 80
80 0 0 K 18 K 0 0 89
81 0 0 G 11 L 0 S 90
82 S 0 Q 9 I 0 S 91
83 S 0 V 27 L 0 S 92
84 S 0 Q 36 T 0 S 93
85 S 0 L 51 V 0 S 94
86 S 0 N 54 F 0 S 95
87 S 0 A 58 A 0 S 96
88 0 0 G 0 0 0 0 0
89 0 0 S 0 0 0 0 0
90 0 0 K 0 0 0 0 0
91 0 0 T 39 R 0 S 97
92 S 0 K 47 D 0 S 98
93 S 0 I 61 I 0 S 99
94 S 0 A 53 S 0 S 100
95 S 0 E 55 V 0 S 101
96 S 0 A 56 V 0 S 102
97 0 0 S 48 P 0 0 103
98 0 0 E 44 E 0 0 104
99 0 0 D 0 0 0 0 0
100 0 0 G 0 0 0 0 0
101 0 0 F 0 0 0 0 0
102 0 0 P 0 0 0 0 0
103 0 0 E 0 0 0 0 0
104 0 0 S 0 0 0 0 0
105 0 0 S 0 0 0 0 0
106 0 0 Q 0 0 0 0 0
107 0 0 I 0 0 0 0 0
108 0 0 P 0 0 0 0 0
109 0 0 E 0 0 0 0 0
110 0 0 N 0 0 0 0 0
111 0 0 T 0 0 0 0 0
112 0 0 P 0 0 0 0 0
113 0 0 T 0 0 0 0 0
114 0 0 A 0 0 0 0 0
Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
1o7iB00 3uljB00 114 80 71.73 73 64 7 6.17
1o7iB00 4gs3A00 114 90 79.27 81 71 15 2.75
3uljB00 4gs3A00 80 90 77.86 69 76 7 3.45

0 comments on commit 74612c4

Please sign in to comment.