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NEWS.md

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CytoPipelineUtils 0.99

CytoPipelineUtils 0.99.6

  • anonymizeMarkers() can now work with no marker anonymization (only keyword changes)
  • implemented addFlowJoGatesInfo()

CytoPipelineUtils 0.99.5

  • in applyFlowJoGate(): try to avoid using 'All Samples' generic sample group to query flowjo workspace (in order to avoid CytoML warning when using 'All Samples')

CytoPipelineUtils 0.99.4

  • Added getEventNbFromFJGates()
  • In getFlowJoLabels(), if one of the cellTypes is not found in any sample of any group, issue warning instead of error, populates corresponding output with NA's

CytoPipelineUtils 0.99.3

  • applyFlowJoGate() can now match sample file with sample names in wsp file, by using pattern matching, instead of full file name matching

CytoPipelineUtils 0.99.2

  • added 2nd version of removeDebrisFlowClust()
  • applyFlowJoGate() can now use different flowJo wsp files, depending on pData

CytoPipelineUtils 0.99.1

  • added support for FlowJo manual gating as a CytoProcessingStep
  • used file.path() instead of paste0() to construct file paths

CytoPipelineUtils 0.99.0

  • First version