GitHub - UMCUGenetics/SAP42: contains legacy SOLID pipeline

Name		Name	Last commit message	Last commit date
Latest commit History 1 Commits
modules		modules
resources/Diagnostics		resources/Diagnostics
web		web
SAP42		SAP42
SAP42_bam		SAP42_bam
SAP42_check		SAP42_check
SAP42_check_variants		SAP42_check_variants
SAP42_compare_variants		SAP42_compare_variants
SAP42_coverage		SAP42_coverage
SAP42_create		SAP42_create
SAP42_email		SAP42_email
SAP42_install		SAP42_install
SAP42_merge_lanes		SAP42_merge_lanes
SAP42_pileup		SAP42_pileup
SAP42_run		SAP42_run
SAP42_run_array		SAP42_run_array
SAP42_run_variants		SAP42_run_variants
SAP42_sleep		SAP42_sleep
SAP42_split		SAP42_split
SAP42_statistics		SAP42_statistics
SAP42_template		SAP42_template
SAP42_update		SAP42_update
SAP42_variants		SAP42_variants
annotator.pl		annotator.pl
bam.sap42.html		bam.sap42.html
checkMappabillityBam.pl		checkMappabillityBam.pl
csfastaToFastq		csfastaToFastq
data.sap42.list		data.sap42.list
data5500.sap42.list		data5500.sap42.list
dataFQ.sap42.list		dataFQ.sap42.list
dataXSQ.sap42.list		dataXSQ.sap42.list
post_merge_bams.pl		post_merge_bams.pl
sap42.ini		sap42.ini
sap42.ini.template		sap42.ini.template
settings.pm		settings.pm
version.ini		version.ini
xsq_to_csfasta.pl		xsq_to_csfasta.pl