GitHub - UNCDEPENdLab/Possum_Motion: Initial possum usage and reproduce-ables

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 196 Commits
PBS_scripts		PBS_scripts
bin		bin
buildTemplate		buildTemplate
cmp_motion		cmp_motion
defaults		defaults
output		output
possum_debug		possum_debug
possum_example		possum_example
queIncomplete		queIncomplete
sim_cfg		sim_cfg
toBeEmailed		toBeEmailed
README		README
basefiles.ls		basefiles.ls
combine_output.bash		combine_output.bash
plot4dActivation.R		plot4dActivation.R
qsub_possum4d.bash		qsub_possum4d.bash
restPreproc_possum.bash		restPreproc_possum.bash
setFiles.sh		setFiles.sh

Repository files navigation

PBS_scripts/    -- submitting the real jobs 

setFiles.sh	-- use numvols,TR, base motion and base activation files
		    to create pulse, activation, and motion files for possum

bin/		-- possum,possum_sum,signal2image pulse 3dTcat,3drefit 
variable/	-- motion, activation
defaults/ 	-- brain, pulse, rf, mr
logs/		-- pulseSetup and makefiles log


basefiles.ls    -- list of files used by possum but not tracked by git
                -- rsync -av --files-from basefiles.ls ./ foranw@blacklight:~/Possum-02-2012/