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loadReg corrupting the global environment #24

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jsta opened this issue Jul 21, 2017 · 5 comments
Closed

loadReg corrupting the global environment #24

jsta opened this issue Jul 21, 2017 · 5 comments

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@jsta
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jsta commented Jul 21, 2017 •
edited

I am getting an error:

Error in as.environment(NULL) : using 'as.environment(NULL)' is defunct

when I try to run loadReg on the example data more than once in a row:

library(rloadest)
data(app1.calib)

app1.lr <- loadReg(Phosphorus ~ model(1), data = app1.calib,
  flow = "FLOW", dates = "DATES", conc.units="mg/L",
  station="Illinois River at Marseilles, Ill.")

app1.lr <- loadReg(Phosphorus ~ model(1), data = app1.calib,
  flow = "FLOW", dates = "DATES", conc.units="mg/L",
  station="Illinois River at Marseilles, Ill.")

Then my R session is completely killed. Any function call returns the error above until I restart R. The strange thing is I get no error running the first time. This also affects selBestModel because it iterates on loadReg multiple times.

Somehow loadReg is corrupting the global environment...

session_info 

Session info ------------------------------------------------------------------
 setting  value                       
 version  R version 3.4.1 (2017-06-30)
 system   x86_64, linux-gnu           
 ui       RStudio (1.1.304)           
 language en_US                       
 collate  en_US.UTF-8                 
 tz       posixrules                  
 date     2017-07-21                  

Packages -------------------------------------------------------------------------
 package       * version     date       source                            
 akima           0.6-2       2016-12-20 CRAN (R 3.4.0)                    
 assertthat      0.2.0       2017-04-11 CRAN (R 3.4.0)                    
 base          * 3.4.1       2017-07-08 local                             
 bindr           0.1         2016-11-13 cran (@0.1)                       
 bindrcpp        0.2         2017-06-17 cran (@0.2)                       
 boot            1.3-19      2017-04-21 CRAN (R 3.4.0)                    
 car             2.1-5       2017-07-04 cran (@2.1-5)                     
 codetools       0.2-15      2016-10-05 CRAN (R 3.3.1)                    
 coin            1.2-1       2017-07-17 cran (@1.2-1)                     
 compiler        3.4.1       2017-07-08 local                             
 curl            2.8.1       2017-07-21 Github (jeroen/curl@500b838)      
 dataRetrieval * 2.7.2       2017-05-23 cran (@2.7.2)                     
 datasets      * 3.4.1       2017-07-08 local                             
 devtools      * 1.13.2.9000 2017-07-04 Github (hadley/devtools@d3482c5)  
 digest          0.6.12      2017-01-27 CRAN (R 3.4.0)                    
 dplyr           0.7.1.9000  2017-07-19 Github (tidyverse/dplyr@fa36b50)  
 glue            1.1.1       2017-06-21 cran (@1.1.1)                     
 graphics      * 3.4.1       2017-07-08 local                             
 grDevices     * 3.4.1       2017-07-08 local                             
 grid            3.4.1       2017-07-08 local                             
 hms             0.3         2016-11-22 CRAN (R 3.4.0)                    
 httr            1.2.1       2016-07-03 CRAN (R 3.4.0)                    
 jsonlite        1.5         2017-06-01 cran (@1.5)                       
 KernSmooth      2.23-15     2015-06-29 CRAN (R 3.4.0)                    
 lattice         0.20-35     2017-03-25 CRAN (R 3.3.3)                    
 leaps           3.0         2017-01-10 CRAN (R 3.4.1)                    
 lme4            1.1-13      2017-04-19 cran (@1.1-13)                    
 lubridate     * 1.6.0       2016-09-13 CRAN (R 3.4.0)                    
 magrittr        1.5         2014-11-22 CRAN (R 3.4.0)                    
 MASS            7.3-47      2017-04-21 CRAN (R 3.4.0)                    
 Matrix          1.2-10      2017-04-28 CRAN (R 3.4.0)                    
 MatrixModels    0.4-1       2015-08-22 cran (@0.4-1)                     
 memoise         1.1.0       2017-04-21 CRAN (R 3.4.0)                    
 methods       * 3.4.1       2017-07-08 local                             
 mgcv            1.8-17      2017-02-08 CRAN (R 3.4.0)                    
 minqa           1.2.4       2014-10-09 cran (@1.2.4)                     
 modeltools      0.2-21      2013-09-02 CRAN (R 3.4.1)                    
 multcomp        1.4-6       2016-07-14 CRAN (R 3.4.1)                    
 mvtnorm         1.0-6       2017-03-02 CRAN (R 3.4.1)                    
 NADA            1.6-1       2017-03-31 cran (@1.6-1)                     
 nlme            3.1-131     2017-02-06 CRAN (R 3.4.0)                    
 nloptr          1.0.4       2014-08-04 cran (@1.0.4)                     
 nnet            7.3-12      2016-02-02 CRAN (R 3.4.0)                    
 parallel        3.4.1       2017-07-08 local                             
 pbkrtest        0.4-7       2017-03-15 cran (@0.4-7)                     
 pkgbuild        0.0.0.9000  2017-07-04 Github (r-pkgs/pkgbuild@8aab60b)  
 pkgconfig       2.0.1       2017-03-21 cran (@2.0.1)                     
 pkgload         0.0.0.9000  2017-05-19 Github (r-pkgs/pkgload@119cf9a)   
 plyr            1.8.4       2016-06-08 CRAN (R 3.4.0)                    
 quantreg        5.33        2017-04-18 cran (@5.33)                      
 R6              2.2.2       2017-06-17 cran (@2.2.2)                     
 randtests       1.0         2014-11-17 cran (@1.0)                       
 Rcpp            0.12.12     2017-07-15 cran (@0.12.12)                   
 readr           1.1.1       2017-05-16 cran (@1.1.1)                     
 reshape2        1.4.2       2016-10-22 CRAN (R 3.4.0)                    
 rlang           0.1.1.9000  2017-07-02 Github (hadley/rlang@ff87439)     
 rloadest      * 0.4.4       2017-07-21 Github (USGS-R/rloadest@7f285e6)  
 sandwich        2.3-4       2015-09-24 CRAN (R 3.4.1)                    
 segmented       0.5-2.1     2017-06-14 CRAN (R 3.4.1)                    
 smwrBase      * 1.1.3       2017-07-21 Github (USGS-R/smwrBase@f7bef98)  
 smwrGraphs    * 1.1.2       2017-07-21 Github (USGS-R/smwrGraphs@421d57d)
 smwrQW        * 0.7.12      2017-07-21 Github (USGS-R/smwrQW@dccd129)    
 smwrStats     * 0.7.5       2017-07-21 Github (USGS-R/smwrStats@c442d28) 
 sp              1.2-5       2017-06-29 cran (@1.2-5)                     
 SparseM         1.77        2017-04-23 cran (@1.77)                      
 splines         3.4.1       2017-07-08 local                             
 stats         * 3.4.1       2017-07-08 local                             
 stats4          3.4.1       2017-07-08 local                             
 stringi         1.1.5       2017-04-07 CRAN (R 3.4.0)                    
 stringr         1.2.0       2017-02-18 CRAN (R 3.4.0)                    
 survival        2.41-3      2017-04-04 CRAN (R 3.4.0)                    
 TH.data         1.0-8       2017-01-23 CRAN (R 3.4.1)                    
 tibble          1.3.3       2017-05-28 cran (@1.3.3)                     
 tools           3.4.1       2017-07-08 local                             
 truncnorm       1.0-7       2014-01-21 cran (@1.0-7)                     
 utils         * 3.4.1       2017-07-08 local                             
 withr           1.0.2       2016-06-20 CRAN (R 3.4.0)                    
 XML             3.98-1.9    2017-06-19 cran (@3.98-1.)                   
 xml2            1.1.1       2017-01-24 cran (@1.1.1)                     
 yaml            2.1.14      2016-11-12 CRAN (R 3.4.0)                    
 zCompositions   1.0.3-1     2016-04-14 cran (@1.0.3-1)                   
 zoo             1.8-0       2017-04-12 CRAN (R 3.4.0)
@aappling-usgs
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Well, the good news and bad news is that the above code doesn't corrupt my environment. I even tried downloading some non-CRAN/GRAN packages to match yours - I still can't reproduce the problem. At this point the only session_info difference I see is that I have Windows while you have Linux.

So...maybe try one more time, restarting R and RStudio and ensuring that there is absolutely nothing being reloaded into your fresh session before you try the code again?

You could also try reinstalling the smwr suite of packages and rloadest, just in case something got corrupted.

Also, any history you can provide might help. Have you had these lines running well in the past? How long ago was that? Any guesses at which packages you've updated between when things worked and when they stopped working?

session_info()
Session info ------------------------------------------------------------------------------------------------------------------------------
 setting  value                       
 version  R version 3.4.1 (2017-06-30)
 system   x86_64, mingw32             
 ui       RStudio (1.0.153)           
 language (EN)                        
 collate  English_United States.1252  
 tz       America/Phoenix             
 date     2017-07-21                  

Packages ----------------------------------------------------------------------------------------------------------------------------------
 package       * version     date       source                            
 akima           0.6-2       2016-12-20 CRAN (R 3.4.1)                    
 assertthat      0.2.0       2017-04-11 CRAN (R 3.4.0)                    
 base          * 3.4.1       2017-06-30 local                             
 bindr           0.1         2016-11-13 CRAN (R 3.4.1)                    
 bindrcpp        0.2         2017-06-17 CRAN (R 3.4.1)                    
 boot            1.3-19      2017-02-11 CRAN (R 3.4.1)                    
 car             2.1-5       2017-07-04 CRAN (R 3.4.1)                    
 codetools       0.2-15      2016-10-05 CRAN (R 3.4.1)                    
 coin            1.2-1       2017-07-17 CRAN (R 3.4.1)                    
 compiler        3.4.1       2017-06-30 local                             
 curl            2.8.1       2017-07-21 CRAN (R 3.4.1)                    
 dataRetrieval * 2.7.2       2017-05-23 CRAN (R 3.4.1)                    
 datasets      * 3.4.1       2017-06-30 local                             
 devtools        1.13.2.9000 2017-07-21 Github (hadley/devtools@d3482c5)  
 digest          0.6.12      2017-01-27 CRAN (R 3.4.1)                    
 dplyr           0.7.1.9000  2017-07-21 Github (tidyverse/dplyr@fa36b50)  
 glue            1.1.1       2017-06-21 CRAN (R 3.4.1)                    
 graphics      * 3.4.1       2017-06-30 local                             
 grDevices     * 3.4.1       2017-06-30 local                             
 grid            3.4.1       2017-06-30 local                             
 hms             0.3         2016-11-22 CRAN (R 3.4.1)                    
 httr            1.2.1       2016-07-03 CRAN (R 3.4.1)                    
 jsonlite        1.5         2017-06-01 CRAN (R 3.4.1)                    
 KernSmooth      2.23-15     2015-06-29 CRAN (R 3.4.1)                    
 lattice         0.20-35     2017-03-25 CRAN (R 3.4.1)                    
 leaps           3.0         2017-01-10 CRAN (R 3.4.1)                    
 lme4            1.1-13      2017-04-19 CRAN (R 3.4.1)                    
 lubridate     * 1.6.0       2016-09-13 CRAN (R 3.4.1)                    
 magrittr        1.5         2014-11-22 CRAN (R 3.4.1)                    
 MASS            7.3-47      2017-02-26 CRAN (R 3.4.1)                    
 Matrix          1.2-10      2017-05-03 CRAN (R 3.4.1)                    
 MatrixModels    0.4-1       2015-08-22 CRAN (R 3.4.1)                    
 memoise         1.1.0       2017-04-21 CRAN (R 3.4.1)                    
 methods       * 3.4.1       2017-06-30 local                             
 mgcv            1.8-17      2017-02-08 CRAN (R 3.4.1)                    
 minqa           1.2.4       2014-10-09 CRAN (R 3.4.1)                    
 modeltools      0.2-21      2013-09-02 CRAN (R 3.4.0)                    
 multcomp        1.4-6       2016-07-14 CRAN (R 3.4.1)                    
 mvtnorm         1.0-6       2017-03-02 CRAN (R 3.4.0)                    
 NADA            1.6-1       2017-03-31 CRAN (R 3.4.1)                    
 nlme            3.1-131     2017-02-06 CRAN (R 3.4.1)                    
 nloptr          1.0.4       2014-08-04 CRAN (R 3.4.1)                    
 nnet            7.3-12      2016-02-02 CRAN (R 3.4.1)                    
 parallel        3.4.1       2017-06-30 local                             
 pbkrtest        0.4-7       2017-03-15 CRAN (R 3.4.1)                    
 pkgbuild        0.0.0.9000  2017-07-21 Github (r-pkgs/pkgbuild@8aab60b)  
 pkgconfig       2.0.1       2017-03-21 CRAN (R 3.4.1)                    
 pkgload         0.0.0.9000  2017-07-21 Github (r-lib/pkgload@119cf9a)    
 plyr            1.8.4       2016-06-08 CRAN (R 3.4.1)                    
 quantreg        5.33        2017-04-18 CRAN (R 3.4.1)                    
 R6              2.2.2       2017-06-17 CRAN (R 3.4.1)                    
 randtests       1.0         2014-11-17 CRAN (R 3.4.0)                    
 Rcpp            0.12.12     2017-07-15 CRAN (R 3.4.1)                    
 readr           1.1.1       2017-05-16 CRAN (R 3.4.1)                    
 reshape2        1.4.2       2016-10-22 CRAN (R 3.4.1)                    
 rlang           0.1.1.9000  2017-07-21 Github (hadley/rlang@ff87439)     
 rloadest      * 0.4.4       2017-05-02 local                             
 rstudioapi      0.6         2016-06-27 CRAN (R 3.4.1)                    
 sandwich        2.3-4       2015-09-24 CRAN (R 3.4.1)                    
 segmented       0.5-2.1     2017-06-14 CRAN (R 3.4.0)                    
 smwrBase      * 1.1.3       2017-07-21 Github (USGS-R/smwrBase@f7bef98)  
 smwrGraphs    * 1.1.2       2017-07-21 Github (USGS-R/smwrGraphs@421d57d)
 smwrQW        * 0.7.12      2017-07-21 Github (USGS-R/smwrQW@dccd129)    
 smwrStats     * 0.7.5       2017-07-21 Github (USGS-R/smwrStats@c442d28) 
 sp              1.2-5       2017-06-29 CRAN (R 3.4.1)                    
 SparseM         1.77        2017-04-23 CRAN (R 3.4.0)                    
 splines         3.4.1       2017-06-30 local                             
 stats         * 3.4.1       2017-06-30 local                             
 stats4          3.4.1       2017-06-30 local                             
 stringi         1.1.5       2017-04-07 CRAN (R 3.4.0)                    
 stringr         1.2.0       2017-02-18 CRAN (R 3.4.1)                    
 survival        2.41-3      2017-04-04 CRAN (R 3.4.1)                    
 TH.data         1.0-8       2017-01-23 CRAN (R 3.4.1)                    
 tibble          1.3.3       2017-05-28 CRAN (R 3.4.0)                    
 tools           3.4.1       2017-06-30 local                             
 truncnorm       1.0-7       2014-01-21 CRAN (R 3.4.0)                    
 utils         * 3.4.1       2017-06-30 local                             
 withr           1.0.2       2016-06-20 CRAN (R 3.4.1)                    
 XML             3.98-1.9    2017-06-19 CRAN (R 3.4.0)                    
 xml2            1.1.1       2017-01-24 CRAN (R 3.4.1)                    
 zCompositions   1.0.3-1     2016-04-14 CRAN (R 3.4.1)                    
 zoo             1.8-0       2017-04-12 CRAN (R 3.4.1)

@jsta
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jsta commented Jul 22, 2017

That is really strange given that you have the exact same swmr and rloadest versions.

It took me quite some time (plenty of reloads and reinstalls) to pin down the cause of the error message so I'm positive that is not the issue.

This is my first experience with the package so this is my first time running these lines.

I think my next step is to try the package in a Docker environment to make absolutely sure the problem is not unique to my machine.

@jsta
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jsta commented Jul 22, 2017 •
edited

Arg, I can't run loadReg a single time on Docker:

docker pull rocker/tidyverse
docker run -it rocker/tidyverse /bin/bash

Rscript -e "devtools::install_github('USGS-R/smwrBase')"
Rscript -e "devtools::install_github('USGS-R/smwrGraphs')"
Rscript -e "devtools::install_github('USGS-R/smwrStats')"
Rscript -e "devtools::install_github('USGS-R/smwrQW')"
Rscript -e "devtools::install_github('USGS-R/rloadest')"

Rscript -e "example('loadReg', package = 'rloadest')"

loadRg> # From application 1 in the vignettes
loadRg> data(app1.calib)

loadRg> app1.lr <- loadReg(Phosphorus ~ model(1), data = app1.calib,
loadRg+ flow = "FLOW", dates = "DATES", conc.units="mg/L",
loadRg+ station="Illinois River at Marseilles, Ill.")

*** caught segfault ***
address 0x7ffef3d22e08, cause 'memory not mapped'

Traceback 1: .Fortran("evalaml", NOBSC = as.integer(NOBSC), NPAR = as.integer(NPAR), XLCAL = as.matrix(X), YLCAL = Y@.Data[, 1L], YD = Y@.Data[, 2L], CENSFLAG = Y@censor.codes, PARMLE = double(NPAR + 1L), PARAML = double(NPAR + 1L), BIAS = double(NPAR + 1L), CV = matrix(0, NPAR + 1L, NPAR + 1L), SBIAS = double(NPAR + 1L), SCV = matrix(0, NPAR + 1L, NPAR + 1L), STDDEV = double(NPAR + 1L), PVAL = double(NPAR + 1L), COV = matrix(0, NPAR + 1L, NPAR + 1L), RESID = double(NOBSC), RSQ = double(1L), LLR = double(1L), SCORR = double(1L), LLRAML = double(1L), PLEVAML = double(1L), DF = integer(1L), LogNorm = dist == "lognormal", YPRED = double(NOBSC), AIC = double(1L), SPPC = double(1L), IERR = integer(1L)) 2: censReg_AMLE.fit(Y, X, "lognormal") 3: loadReg(Phosphorus ~ model(1), data = app1.calib, flow = "FLOW", dates = "DATES", conc.units = "mg/L", station = "Illinois River at Marseilles, Ill.") 4: eval(ei, envir) 5: eval(ei, envir) 6: withVisible(eval(ei, envir)) 7: source(tf, local, echo = echo, prompt.echo = paste0(prompt.prefix, getOption("prompt")), continue.echo = paste0(prompt.prefix, getOption("continue")), verbose = verbose, max.deparse.length = Inf, encoding = "UTF-8", skip.echo = skips, keep.source = TRUE) 8: example("loadReg", package = "rloadest")
session_info 

Session info ------------------------------------------------------------------
 setting  value                       
 version  R version 3.4.1 (2017-06-30)
 system   x86_64, linux-gnu           
 ui       X11                         
 language (EN)                        
 collate  en_US.UTF-8                 
 tz       UTC                         
 date     2017-07-22                  

Packages ----------------------------------------------------------------------
 package       * version  date       source                            
 akima           0.6-2    2016-12-20 cran (@0.6-2)                     
 assertthat      0.2.0    2017-04-11 CRAN (R 3.4.1)                    
 base          * 3.4.1    2017-07-22 local                             
 bindr           0.1      2016-11-13 CRAN (R 3.4.1)                    
 bindrcpp        0.2      2017-06-17 CRAN (R 3.4.1)                    
 boot            1.3-19   2017-04-21 cran (@1.3-19)                    
 car             2.1-5    2017-07-04 cran (@2.1-5)                     
 codetools       0.2-15   2016-10-05 CRAN (R 3.4.1)                    
 coin            1.2-1    2017-07-17 cran (@1.2-1)                     
 compiler        3.4.1    2017-07-22 local                             
 curl            2.8.1    2017-07-21 CRAN (R 3.4.1)                    
 dataRetrieval * 2.7.2    2017-05-23 cran (@2.7.2)                     
 datasets      * 3.4.1    2017-07-22 local                             
 devtools        1.13.2   2017-06-02 CRAN (R 3.4.1)                    
 digest          0.6.12   2017-01-27 CRAN (R 3.4.1)                    
 dplyr           0.7.2    2017-07-20 CRAN (R 3.4.1)                    
 glue            1.1.1    2017-06-21 CRAN (R 3.4.1)                    
 graphics      * 3.4.1    2017-07-22 local                             
 grDevices     * 3.4.1    2017-07-22 local                             
 grid            3.4.1    2017-07-22 local                             
 hms             0.3      2016-11-22 CRAN (R 3.4.1)                    
 httr            1.2.1    2016-07-03 CRAN (R 3.4.1)                    
 jsonlite        1.5      2017-06-01 CRAN (R 3.4.1)                    
 KernSmooth      2.23-15  2015-06-29 cran (@2.23-15)                   
 lattice         0.20-35  2017-03-25 CRAN (R 3.4.1)                    
 leaps           3.0      2017-01-10 cran (@3.0)                       
 lme4            1.1-13   2017-04-19 cran (@1.1-13)                    
 lubridate     * 1.6.0    2016-09-13 CRAN (R 3.4.1)                    
 magrittr        1.5      2014-11-22 CRAN (R 3.4.1)                    
 MASS            7.3-47   2017-04-21 CRAN (R 3.4.1)                    
 Matrix          1.2-10   2017-04-28 CRAN (R 3.4.1)                    
 MatrixModels    0.4-1    2015-08-22 CRAN (R 3.4.1)                    
 memoise         1.1.0    2017-04-21 CRAN (R 3.4.1)                    
 methods       * 3.4.1    2017-07-22 local                             
 mgcv            1.8-17   2017-02-08 CRAN (R 3.4.1)                    
 minqa           1.2.4    2014-10-09 cran (@1.2.4)                     
 modeltools      0.2-21   2013-09-02 cran (@0.2-21)                    
 multcomp        1.4-6    2016-07-14 CRAN (R 3.4.1)                    
 mvtnorm         1.0-6    2017-03-02 CRAN (R 3.4.1)                    
 NADA            1.6-1    2017-03-31 cran (@1.6-1)                     
 nlme            3.1-131  2017-02-06 CRAN (R 3.4.1)                    
 nloptr          1.0.4    2014-08-04 cran (@1.0.4)                     
 nnet            7.3-12   2016-02-02 CRAN (R 3.4.1)                    
 parallel        3.4.1    2017-07-22 local                             
 pbkrtest        0.4-7    2017-03-15 cran (@0.4-7)                     
 pkgconfig       2.0.1    2017-03-21 CRAN (R 3.4.1)                    
 plyr            1.8.4    2016-06-08 CRAN (R 3.4.1)                    
 quantreg        5.33     2017-04-18 CRAN (R 3.4.1)                    
 R6              2.2.2    2017-06-17 CRAN (R 3.4.1)                    
 randtests       1.0      2014-11-17 cran (@1.0)                       
 Rcpp            0.12.12  2017-07-15 CRAN (R 3.4.1)                    
 readr           1.1.1    2017-05-16 CRAN (R 3.4.1)                    
 reshape2        1.4.2    2016-10-22 CRAN (R 3.4.1)                    
 rlang           0.1.1    2017-05-18 CRAN (R 3.4.1)                    
 rloadest      * 0.4.4    2017-07-22 Github (USGS-R/rloadest@7f285e6)  
 sandwich        2.3-4    2015-09-24 CRAN (R 3.4.1)                    
 segmented       0.5-2.1  2017-06-14 cran (@0.5-2.1)                   
 smwrBase      * 1.1.3    2017-07-22 Github (USGS-R/smwrBase@f7bef98)  
 smwrGraphs    * 1.1.2    2017-07-22 Github (USGS-R/smwrGraphs@421d57d)
 smwrQW        * 0.7.12   2017-07-22 Github (USGS-R/smwrQW@dccd129)    
 smwrStats     * 0.7.5    2017-07-22 Github (USGS-R/smwrStats@c442d28) 
 sp              1.2-5    2017-06-29 CRAN (R 3.4.1)                    
 SparseM         1.77     2017-04-23 CRAN (R 3.4.1)                    
 splines         3.4.1    2017-07-22 local                             
 stats         * 3.4.1    2017-07-22 local                             
 stats4          3.4.1    2017-07-22 local                             
 stringi         1.1.5    2017-04-07 CRAN (R 3.4.1)                    
 stringr         1.2.0    2017-02-18 CRAN (R 3.4.1)                    
 survival        2.41-3   2017-04-04 CRAN (R 3.4.1)                    
 TH.data         1.0-8    2017-01-23 CRAN (R 3.4.1)                    
 tibble          1.3.3    2017-05-28 CRAN (R 3.4.1)                    
 tools           3.4.1    2017-07-22 local                             
 truncnorm       1.0-7    2014-01-21 cran (@1.0-7)                     
 utils         * 3.4.1    2017-07-22 local                             
 withr           1.0.2    2016-06-20 CRAN (R 3.4.1)                    
 XML             3.98-1.9 2017-06-19 cran (@3.98-1.)                   
 xml2            1.1.1    2017-01-24 CRAN (R 3.4.1)                    
 zCompositions   1.0.3-1  2016-04-14 cran (@1.0.3-1)                   
 zoo             1.8-0    2017-04-12 CRAN (R 3.4.1)

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jsta commented Jul 22, 2017

I get the error even if I install from GRAN.

@jsta jsta mentioned this issue Jul 22, 2017
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jsta commented Jul 24, 2017

This error is fixed by USGS-R/smwrQW#28

@jsta jsta closed this as completed Jul 24, 2017
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