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Implementation of a BRNN based model for protein secondary structure prediction

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Udayraj123/protein-secondary-structure-prediction

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.gitignore

.gitignore

 
 

README.md

README.md

 
 

corpus_creation.py

corpus_creation.py

 
 

data_checking.py

data_checking.py

 
 

dependencies_installation.sh

dependencies_installation.sh

 
 

modelForPSSP.py

modelForPSSP.py

 
 

processCB613.sh

processCB613.sh

 
 

utils.py

utils.py

 
 

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protein-secondary-structure-prediction

The aim of this repo is to provide implementation of GRU based deep model for protein secondary structure prediction. Long-term aim is to improve the current known accuracy for the same task. Done by Udayraj Deshmukh and Sudhanshu Ranjan

Steps to run this model

  1. chmod +x dependencies_installation.sh processCB613.sh
  2. run processCB613.sh
  3. run modelForPSSP.py

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Implementation of a BRNN based model for protein secondary structure prediction

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