Provides specialized Tripal fields and importers for germplasm. This package is a collection of modules for to ensure you have choice over what functionality most suits your datasets and Tripal site purpose.
- UofS Pulse Binfo Germplasm: provides data importers and general fields for all germplasm.
- RIL Summary: provides a germplasm matrix summarizing RIL parentage including species.
- Germplasm Collection: provides specialized fields for supporting germplasm collections.
See our documentation for detail installation and configuration instructions.
If you were using germ_summary, tripal_germplasm_importer, germcollection then you will need to upgrade to this package to access new functionality and bug fixes. To upgrade, see our documentation for detailed instructions.
Note: the functionality from separate modules will still be available in this package and any new functionality will be developed here. Additionally, germ_summary has been renamed to rilsummary to reflect it's focus on RILs.
There is extensive documentation available for this package through ReadtheDocs. You can access our documentation here.
Automated testing for this module was implemented using Tripal Test Suite and is run automatically using Travis CI. You can see the build status above.
This work is supported by Saskatchewan Pulse Growers [grant: BRE1516, BRE0601], Western Grains Research Foundation, Genome Canada [grant: 8302, 16302], Government of Saskatchewan [grant: 20150331], and the University of Saskatchewan.
Shen Y, Sanderson LA, Tan R (2019) KP Germplasm: providing extended Tripal support of germplasm data for breeding program and genebanks. Development Version. University of Saskatchewan, Pulse Crop Research Group, Saskatoon, SK, Canada.