Pulse Bioinformatics, University of Saskatchewan
Our group has a strong focus on creating flexible, re-usable open-source software during the course of our work.
- Saskatoon, Saskatchewan
- https://uofs-pulse-binfo.github.io
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Repositories
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- vcf_filter Public
Form interface so users can custom filter existing VCF files and export in a variety of formats.
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- rawphenotypes Public
A Tripal module for storing raw phenotypic data. Specifically meant to help researchers contribute raw data, visualize summaries and download for further analysis.
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- genotypes_loader Public
A Drush-based loader for VCF files that follows the genotype storage rules outlined by ND genotypes.
- tripal_ws_brapi Public
- analyzedphenotypes Public
Tripal/Drupal support for analyzed phenotypic data including data loaders, exporters, trait pages and summaries on germplasm pages.
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