Projet AAA

To run main.r, you will need to install Pault Pearson's TDA Mapper and and Christopher Gandrud's igraph

library(devtools)
devtools::install_github("paultpearson/TDAmapper")
devtools::install_github("christophergandrud/networkD3")

Naming conventions

Naming convention: [filter_value_id]_[num_intervals_x]_[num_intervals_y]_[percent_overlap]_[num_bins].html

1. PCA1 + PCA2
2. PCA1 + angles
3. tsne
4. PCA1 + PCA2 - order
5. PCA1 + angles - order
6. tsne - order