1.7.0-beta

Major

• Dataset detail page re-design
• Dynamic meta tags implemented so the dataset title will appear when linked in Slack, etc.
• New 'Other' licence allowing terms of use to be defined using data usage policy
• MaveVis link shows for relevant datasets only
• MaveVis link moved to more prominent location
• CSV format interoperability with R

Minor

• Django security patches
• Minor bug fixes
• UI inconsistency fixes
• Pageview statistics tracking
• Switch to Black formatting
• Address security patch (update urllib3 to v1.24.3)
• Revert Metapub to v0.4.4 and Eutils to v0.5.0
• Utility bash script for deployment update
• Added citation file to version control

1.6.1-beta

Minor

• Fixed font rendering issues on Safari
• Fixed back button returning JSON response in Chrome
• Search table loading speed optimizations
• Contributors and Data usage policy re-ordered to come between Method and Keywords
• References re-ordered to come before Contributors
• Removed contributor column from table

1.6.0-beta

Major

• Fixed permission bug in GroupPermissionMixin
• Improved efficiency in profile rendering
• Filtering display name now accepts CSV input
• scoreset list on experiment page shows current versions only
• Removed redundant calls to permission check
• Data usage policy only editable by administrators

Minor

• Tables load in data via AJAX calls and display a loading spinner
• UI enhancements,and style updates
• Navbar groups all profile related pages into a dropdown with a profile icon
• Removed redundant calls to permission check
• Refactored several GroupPermissionMixin methods as properties

1.5.1-beta

Minor

• Fixed bug matched groups with partial class name

1.5.0-beta

Major

• Major optimization of permission lookup significantly speeding up API, Profile and Search
• Data usage policy added as searchable field
• Contributors in data set API no longer nested JSON. Returned as list of usernames
• Updates to About and Documentation

Minor

• Remove email back ends from production and staging
• Table shows most recent versions only
• Search table speed optimizations
• UI typo fixes and missing icon fixes

1.4.1-alpha

Minor

• Fixed bug rendering empty data usage policy in CSV
• Altered wording in search form and detail pages
• Updated renumber command. Now supports --all flag or multiple urns via --urns

1.4.0-alpha

Major

• Added field data_usage_policy to ScoreSet
• Added field category to TargetGene to allow specification of a target type
• Field wt_sequence in scoreset API endpoints renamed to reference_sequence
• CSV files contain data usage policy in comment header
• Additional GET endpoints exposed in API
• Added target_type field to TargetGene JSON in API

Minor

• UI and wording consistency fixes
• Removed display messages suggesting emails have been sent
• Updated django to 1.11.20 security patch
• Experiment detail page partitions score sets by common target element
• Search table groups score sets into common target elements
• Search table contains target type column

1.3.1-alpha

Major

• Fixed bug where publishing would not reset the variant URN starting index
• Fixed issue creating race condition between celery and django db commits
• Fixed issue reading bytes object into json

Minor

• Added countdown on celery apply_async
• Renamed urn to accession in CSV files
• Added command to renumber datasets from 1

1.3.0-alpha

Major

• ScoreSet licence can be changed post publish.
• Licence and download time metadata added to CSV files.
• Amino acids Xaa, ??? and ? are converted to X for compliance with mutalyzer/biocommons hgvs.
• Nucleotides X/x converted to N/n for compliance with mutalyzer/biocommons hgvs.
• URN column added to CSV files.

Minor

• CSV variants sorted by URN.
• Downloads are no longer cached since the licence can be changed.
• Licence field on ScoreSets are version controlled.

Known Issues

• Variant URN f-components do not start at 1 for each ScoreSet. They will be re-numbered in the next release.

1.2.4-alpha

Minor

• Management form submission redirects user to profile
• Updated Javascript Select2 DOM selectors fixing issues in target auto-complete