show total number of bp in voucher page, fixes #328

VoSeq · Jul 29, 2016 · 4777a81 · 4777a81
1 parent ad17ac4
commit 4777a81
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Showing 2 changed files with 10 additions and 4 deletions.
diff --git a/voseq/public_interface/templates/public_interface/show_voucher.html b/voseq/public_interface/templates/public_interface/show_voucher.html
@@ -276,7 +276,7 @@ <h3 class="panel-title"><b>Sequence Information</b></h3>
             {% for item in sequences %}
             <tr>
               <td><a href="/s/{{ item.code }}/{{ item.gene_code }}/">{{ item.gene_code }}</a></td>
-              <td>{{ item.sequence_length }}</td>
+              <td>{{ item.total_number_bp }}</td>
               <td>{{ item.number_ambiguous_bp }}</td>
               <td>{{ item.lab_person }}</td>
               <td><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=nucleotide&term={{ item.accession }}[accn]&doptcmdl=GenBank">{{ item.accession }}</a></td>

diff --git a/voseq/public_interface/views.py b/voseq/public_interface/views.py
@@ -183,9 +183,15 @@ def show_voucher(request, voucher_code):
     local_images_queryset = LocalImages.objects.filter(voucher=voucher_code)
     images_queryset = list(chain(flickr_images_queryset, local_images_queryset))
 
-    seqs_queryset = Sequences.objects.filter(code=voucher_code).values('code', 'gene_code',
-                                                                       'number_ambiguous_bp',
-                                                                       'accession', 'lab_person')
+    seqs_queryset = Sequences.objects.filter(code=voucher_code).values(
+        'code',
+        'gene_code',
+        'number_ambiguous_bp',
+        'accession',
+        'lab_person',
+        'total_number_bp',
+    )
+    print(seqs_queryset)
     sorted_seqs_queryset = sorted(seqs_queryset, key=lambda x: x['gene_code'].lower())
 
     return render(request, 'public_interface/show_voucher.html',