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Batch_bfconvert
Batch_bfconvert
 
 
BigStitcher_BoundingBoxes
BigStitcher_BoundingBoxes
 
 
DownloadDropboxLink
DownloadDropboxLink
 
 
DownloadFromGoogleDrive
DownloadFromGoogleDrive
 
 
DownloadIDR_Omero_resource
DownloadIDR_Omero_resource
 
 
ExpandLabels
ExpandLabels
 
 
Extract_Scale_Translate
Extract_Scale_Translate
 
 
Gitlab-Python
Gitlab-Python
 
 
ImageNumberMatrixPandas
ImageNumberMatrixPandas
 
 
KeyValueStoresForNumpy
KeyValueStoresForNumpy
 
 
MinimumEnclosingParallelogram
MinimumEnclosingParallelogram
 
 
ND2_Nikon
ND2_Nikon
 
 
NumbaReassignPixels
NumbaReassignPixels
 
 
PlotForOleks
PlotForOleks
 
 
PublicPrivateKeyGeneration
PublicPrivateKeyGeneration
 
 
Pystripe
Pystripe
 
 
QupathAnnotations
QupathAnnotations
 
 
RotatingCalipers
RotatingCalipers
 
 
SegmentSliceBySlice_CombineLabels
SegmentSliceBySlice_CombineLabels
 
 
VisualizeIlastikTrackingInNapari
VisualizeIlastikTrackingInNapari
 
 
daskbag_vs_ThreadPoolExecutor
daskbag_vs_ThreadPoolExecutor
 
 
dataclasses_json
dataclasses_json
 
 
functools_caching
functools_caching
 
 
logging_with_eliot
logging_with_eliot
 
 
metadata_tifffile
metadata_tifffile
 
 
numpy_moveaxis
numpy_moveaxis
 
 
pandasDataFrame_to_PyQtAbstractTable
pandasDataFrame_to_PyQtAbstractTable
 
 
read_mp4_with_PIMS
read_mp4_with_PIMS
 
 
relabel_label_images
relabel_label_images
 
 
tifffile_memmap
tifffile_memmap
 
 
.gitignore
.gitignore
 
 
README.md
README.md
 
 

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PythonSnippets

Here, I keep short python code snippets, either as .py and .ipynb (Jupyter notebook). These are mainly short experiments or demonstrators for my own reference, not production code.

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Various python snippets

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