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@WGLab

Wang Genomics Lab

We develop software tools for genome analysis

Popular repositories Loading

  1. Documentation for the ANNOVAR software

    153 156

  2. InterVar Public

    A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

    Python 126 71

  3. DeepMod Public

    DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications

    Python 71 35

  4. PennCNV Public

    Copy number vaiation detection from SNP arrays

    C 61 41

  5. Tutorial on building a computing cluster for bioinformatics

    60 24

Repositories

  • mutformer Public

    A transformer model to predict pathogenic mutations

    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Dec 3, 2021
  • PhenCards Public

    Development of phencards.org web server for one stop shop of phenotype information

    HTML 2 1 13 0 Updated Nov 30, 2021
  • LIQA Public

    Long-read Isoform Quantification and Analysis

    Python 14 4 9 0 Updated Nov 23, 2021
  • AmpRepeat Public

    Tandem repeat detection from long-read amplicon sequencing data

    Python 1 MIT 0 0 1 Updated Nov 18, 2021
  • DeepMod Public

    DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications

    Python 71 35 13 0 Updated Nov 16, 2021
  • NanoCaller Public

    Variant calling tool for long-read sequencing data

    Python 32 MIT 2 8 0 Updated Nov 1, 2021
  • Bioformer Public

    Bioformer: a lightweight BERT model pre-trained from biomedical Literature

    7 Apache-2.0 0 0 0 Updated Oct 29, 2021
  • lncScore Public

    A python package for the identification of lncRNA from the assembled novel transcripts

    Python 13 10 5 0 Updated Oct 28, 2021
  • doc-ANNOVAR Public

    Documentation for the ANNOVAR software

    153 156 57 1 Updated Oct 19, 2021
  • NanoMod Public

    NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data

    Python 29 6 4 0 Updated Oct 5, 2021

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