Wang Genomics Lab

mutformer Public
A transformer model to predict pathogenic mutations

Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Dec 3, 2021
PhenCards Public
Development of phencards.org web server for one stop shop of phenotype information

HTML 2 1 13 0 Updated Nov 30, 2021
LIQA Public
Long-read Isoform Quantification and Analysis

Python 14 4 9 0 Updated Nov 23, 2021
AmpRepeat Public
Tandem repeat detection from long-read amplicon sequencing data

Python 1 MIT 0 0 1 Updated Nov 18, 2021
DeepMod Public
DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications

Python 71 35 13 0 Updated Nov 16, 2021
NanoCaller Public
Variant calling tool for long-read sequencing data

Python 32 MIT 2 8 0 Updated Nov 1, 2021
Bioformer Public
Bioformer: a lightweight BERT model pre-trained from biomedical Literature

7 Apache-2.0 0 0 0 Updated Oct 29, 2021
lncScore Public
A python package for the identification of lncRNA from the assembled novel transcripts

Python 13 10 5 0 Updated Oct 28, 2021
doc-ANNOVAR Public
Documentation for the ANNOVAR software

153 156 57 1 Updated Oct 19, 2021
NanoMod Public
NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data

Python 29 6 4 0 Updated Oct 5, 2021

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