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Update conda recipe
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dfornika committed Feb 22, 2019
1 parent e702fba commit d546e78
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Showing 2 changed files with 5 additions and 13 deletions.
10 changes: 1 addition & 9 deletions conda/build.sh
Expand Up @@ -5,15 +5,7 @@ cp -r $SRC_DIR/scripts $PREFIX
ln -s $PREFIX/bin/MentaLiST.jl $PREFIX/bin/mentalist
chmod +x $PREFIX/bin/mentalist

julia -e 'Pkg.init()'
julia -e 'Pkg.add("ArgParse")'
julia -e 'Pkg.add("Bio")'
julia -e 'Pkg.add("OpenGene")'
julia -e 'Pkg.add("Logging")'
julia -e 'Pkg.add("Lumberjack")'
julia -e 'Pkg.add("FastaIO")'
julia -e 'Pkg.add("JLD")'
julia -e 'Pkg.add("DataStructures")'
julia -e 'using Pkg; Pkg.add([ "Distributed", "ArgParse", "BioSequences", "JSON", "DataStructures", "JLD", "GZip", "Blosc", "FileIO", "TextWrap", "LightXML", "JuMP", "Gurobi"])'

rm -f "$PREFIX"/share/julia/site/lib/v*/*.ji
rm -rf "$PREFIX"/share/julia/site/v*/METADATA
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8 changes: 4 additions & 4 deletions conda/meta.yaml
@@ -1,25 +1,25 @@
{% set name = "MentaLiST" %}
{% set version = "0.2.2" %}
{% set version = "1.0.0" %}

package:
name: {{ name|lower }}
version: {{ version }}

source:
git_url: https://github.com/WGS-TB/MentaLiST.git
git_rev: mentalist_v0.2
git_rev: master

build:
skip: True # [osx]

requirements:
build:
- julia 0.6.1
- julia >=1.0.*
- hdf5
- mpfr
- libxml2
run:
- julia 0.6.1
- julia >=1.0.*
- hdf5
- mpfr
- libxml2
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