The standard WordPress mu-plugins folder is "unstructured". WPezMU-Plugins approximates something closer to the traditional WP plugins folder structure and UI.
It also enables you to control load order, as well as excluded plugins from specified sites with a WP Multisite network. That is, must-use doesn't have to be all must-use.
For more info on WordPress and Must-Use plugins:
http://codex.wordpress.org/Must_Use_Plugins
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If you don't already have one, add your folder: /mu-plugins/. Typically this is within your /wp-content/ folder.
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Within the /mu-plugins/ folder, you should have the folder for this plugin: /wp-ezmu-plugins/. In other words, something along the lines of: .../wp-content/mu-plugins/wp-ezmu-plugins/
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Within the /wp-ezmu-plugins/ folder, look in the folder /move-then-copy/. The file wp-ezmu-plugins.php to up and out of /wp-ezmu-plugins/ but within /mu-plugins/. In other words, instead of having all your plugin in /mu-plugins/ you will (probably) only have this file (wp-ezmu-plugins.php).
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Note: wp-ezmu-plugins.php will no longer be part of your wp-ezmu-plugins repo. But that's okay, you're going to want to customize it anyway.
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Open the file wp-ezmu-plugins.php with your text editor. There are three "example" plugins already there. Remove those examples (if you're not using them) and add the plugins you will be using as mu-plugins.
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WP ezMU-Plugins adds a sub-menu to your WP Admin > Plugins menu so you're able to see a list of your must-use plugins. This is read / view only. All updates must be done manually via wp-ezmu-plugins.php. You will also have to update your plugins manually.