Changes since NeuroDOT v1.2:
1. Updates to Visualization functions:
- PlotCapData: updated source/detector spacing
- PlotMeshSurface: fixed facecolor parameter for case without data
- PlotSlices, PlotSlice, PlotSlicesTimeTrace: adjusted colorbar settings, added white background ‘bgW’ parameter
- Plot_RawData_Metrics_I_DQC: added params.LFO_GI to select which measurments to show in LFO plot
- Applycmap: compatibility with params.BG when all elements are equal to zero
- Adjust_brain_pos, PlotLRMeshes, PlotMeshSurface: added flat map ‘Fnodes’ case
- Plot_RawData_Cap_DQC, PlotCapPhysiologyPower: fixed SNR DQ metrics to compute based on the correct method
- DrawColoredSynchPoints: added colors to plot for up to 7 different pulses
2. Format Compatibility updates:
- Snirf2ndot & Nirs2ndot: enforce column organization of optode position arrays
- LoadVolumetricData, SaveVolumetricData, Nifti_4dfp: compatibility with volumetric data in sagittal and coronal orientations, compatibility with 4D data
- Updated all functions using info.pairs and info.MEAS to be compatible with tables
3. Other function updates:
- GLM_181206: Added R squared output
- Added ParcelBased_fc function
- Added Matrix_Org3 and freezeColors functions to Visualizations
4. Tutorial & Documentation updates:
- Light Modeling: updated all light modeling scripts to use makeAnirfaster, added tutorial for Light Modeling with a subset of measurements, and added tutorial for Light Modeling with a split-pad layout
- Loading Raw Data script and PowerPoint added for loading .snirf, .nirs, and .mat data
- Added Script_for_Viewing_Parcels for parcel-based functional-connectivity analysis
- Added NeuroDOT Tutorials ReadMe file
- Updated NeuroDOT Quick Start Guide