This repository contains code used for quality control and data analysis presented in:
Jones, M.K.; Agarwal, D.; Mazo, K.W.; Chopra, M.; Jurlina, S.L.; Dash, N.; Xu, Q.; Ogata, A.R.; Chow, M.; Hill, A.D.; Kambli, N.K.; Xu, G.; Sasik, R.; Birmingham, A.; Fisch, K.M.; Weinreb, R.N.; Enke, R.A.; Skowronska-Krawczyk, D.; Wahlin, K.J. Chromatin Accessibility and Transcriptional Differences in Human Stem Cell-Derived Early-Stage Retinal Organoids. Cells 2022, 11, 3412. https://doi.org/10.3390/cells11213412
Data is available in NCBI Sequence Read Archive (SRA) under the BioProject accession # PRJNA771414; PRJNA876944 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA771414 and https://www.ncbi.nlm.nih.gov/bioproject/PRJNA876944).