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  1. 3DeeCellTracker 3DeeCellTracker Public

    A python algorithm for tracking cells in 3D time lapse images.

    Python 47 8

  2. Seg2Link Seg2Link Public

    Napari-based 3D cell segmentation software using machine learning predictions as inputs, especially for EM image stacks of brains

    Python 5 1

  3. seg2link_unet2d seg2link_unet2d Public

    For training 2D U-Net and making predictions

    Python 1