Cross-kingdom-synthetic-microbiota

This repository contains code used to the data processsing of Metagenomic RNA seq, amplicon sequencing and generate results and figures for the manuscript "Cross-kingdom synthetic microbiota supports tomato suppression of Fusarium wilt disease"(DOI 10.1038/s41467-022-35452-6). Citation: Zhou X, Wang JT, Liu F, Liang JM, Zhao P, Tsui CKM, Cai L*. Cross-kingdom synthetic microbiota supports tomato suppression of Fusarium wilt disease. Nat Commun 13, 7890 (2022). https://doi.org/10.1038/s41467-022-35452-6