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The repository archives scripts involved in the great duckweed (Spirodela polyrhiza) population genomics project.
Prerequisites
The scripts were written mainly using bash, Perl, Python and R, and calculations were done in an x86_64 GNU/Linux cluster. Please modify the running environment accordingly.
How to start
Before running the scripts, please download the raw data and store the "data" folder in the same directory where you put the "scripts" folder, like this:
working_folder/
scripts/
Fig_1/
Fig_2/
...
data/
Fig_1/
Fig_2/
...
The tar.gz compressed folder of "data" could be downloaded here.