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  1. STitch3D STitch3D Public

    Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices

    Python 47 2

  2. SpatialScope SpatialScope Public

    A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models

    Python 42 4

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  • UCS Public

    Code for "UCS: a unified approach to cell segmentation for subcellular spatial transcriptomics"

    YangLabHKUST/UCS’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jun 30, 2024
  • XPASS Public

    Cross-population analysis using GWAS summary statistics

    YangLabHKUST/XPASS’s past year of commit activity
    R 16 6 4 1 Updated Jun 25, 2024
  • MR-APSS Public

    Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics

    YangLabHKUST/MR-APSS’s past year of commit activity
    R 37 10 2 1 Updated Jun 22, 2024
  • YangLabHKUST/MRbenchmarking’s past year of commit activity
    R 3 0 0 0 Updated Jun 15, 2024
  • SpatialScope Public

    A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models

    YangLabHKUST/SpatialScope’s past year of commit activity
    Python 42 GPL-3.0 4 10 0 Updated May 24, 2024
  • XMAP Public
    YangLabHKUST/XMAP’s past year of commit activity
    HTML 7 0 0 0 Updated Apr 30, 2024
  • SRT_alignment_and_integration Public

    Measurement and comparison of several slices aligning methods and data integrating mathods for spatial transcriptomics data using several ST datasets.

    YangLabHKUST/SRT_alignment_and_integration’s past year of commit activity
    Python 2 0 0 0 Updated Mar 2, 2024
  • mfair Public

    mfair: Matrix Factorization with Auxiliary Information in R

    YangLabHKUST/mfair’s past year of commit activity
    R 6 1 0 0 Updated Feb 1, 2024
  • MATH-4432-Statistical-Machine-Learning Public

    Tutorials for MATH 4432 Statistical Machine Learning, HKUST, Fall 2023

    YangLabHKUST/MATH-4432-Statistical-Machine-Learning’s past year of commit activity
    HTML 3 0 0 0 Updated Nov 29, 2023
  • STitch3D Public

    Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices

    YangLabHKUST/STitch3D’s past year of commit activity
    Python 47 MIT 2 9 0 Updated Nov 20, 2023

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