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Implement differential (w.r.t. reservoir) linear-mixed analysis with bootstrapping #88

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paulmueller opened this issue Sep 22, 2016 · 2 comments
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@paulmueller
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paulmueller commented Sep 22, 2016

The linear mixed effects analysis need some reshaping:

Changes in user interface:

  • Rename the "Treatment" column to "Interpretation"
  • Only allow one treatment, i.e. remove the "Treatment i" options from the "Interpretation" column
  • Add "Reservoir Control" and "Reservoir Treatment" to the "Interpretation" column
  • Help the user to select the right data:
    • if user selects reservoir for treatment/control, tell him to also select reservoir for control/treatment
    • tell the user what will happen to the data (bootstrapping, number of bootstrapping iterations, output is differential deformation or not)

Changes internally:

  • Use python scripts from @maikh88 to perform bootstrapping
  • Bootstrapping should be performed with seeded random data for reproducibility
  • Number of bootstrapping iterations for differential analysis is 5000 1000 (shown, not editable)
@paulmueller
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paulmueller commented Sep 27, 2016

@maikh88 could you please check out and test the latest development build? I have adapted the user interface to pass the reservoir keywords to lin_mix_mod.py (8977d63).

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implemented in 0.6.3

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