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blood_velocity_extraction.m

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myocardial_velocity_extraction.m

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Matlab scripts processing velocity maps of embryonic zebrafish heart dynamics

Supporting codes to process image data acquired by Wang, Zhaoqiang, et al. "A Hybrid of Light-Field and Light-Sheet Imaging to Decouple Myocardial Biomechanics from Intracardiac Flow Dynamics." bioRxiv (2020).

Flowing blood cells (left) and contracting myocardium (right)

Ventricle anatomy reparameterization by center line

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