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Currently to get serratus up and running requires a few steps including building containers, uploading them, initializing AWS credentials and access keys, then submitting a job (sraRunInfo table) to the scheduler via curl. This is detailed in the Readme.md
Create a wrapper script for Serratus such that you can type in serratus --sra <runInfo.csv> and it will go through the launch procedures and begin processing data.
Create a build script for Serratus such that you can type in serratus --build and it will make the AMI via packer, make containers if they don't exist and create all the neccesary resources files for serratus.
This should be implemented in POSIX-complient bash.
The text was updated successfully, but these errors were encountered:
Currently to get
serratus
up and running requires a few steps including building containers, uploading them, initializing AWS credentials and access keys, then submitting a job (sraRunInfo table) to the scheduler via curl. This is detailed in theReadme.md
Create a wrapper script for Serratus such that you can type in
serratus --sra <runInfo.csv>
and it will go through the launch procedures and begin processing data.Create a build script for Serratus such that you can type in
serratus --build
and it will make the AMI via packer, make containers if they don't exist and create all the neccesary resources files for serratus.This should be implemented in POSIX-complient
bash
.The text was updated successfully, but these errors were encountered: