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Serratus CLI front-end wrapper script #22

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2 tasks
ababaian opened this issue Apr 1, 2020 · 0 comments
Open
2 tasks

Serratus CLI front-end wrapper script #22

ababaian opened this issue Apr 1, 2020 · 0 comments
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BASH Scripting / bash related task enhancement New feature or request

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@ababaian
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ababaian commented Apr 1, 2020

Currently to get serratus up and running requires a few steps including building containers, uploading them, initializing AWS credentials and access keys, then submitting a job (sraRunInfo table) to the scheduler via curl. This is detailed in the Readme.md

  • Create a wrapper script for Serratus such that you can type in serratus --sra <runInfo.csv> and it will go through the launch procedures and begin processing data.

  • Create a build script for Serratus such that you can type in serratus --build and it will make the AMI via packer, make containers if they don't exist and create all the neccesary resources files for serratus.

This should be implemented in POSIX-complient bash.

@ababaian ababaian added enhancement New feature or request BASH Scripting / bash related task labels Apr 1, 2020
@ababaian ababaian changed the title Serratus CLI front-end wrapper scrip Serratus CLI front-end wrapper script Apr 1, 2020
@ababaian ababaian added this to Task In Progress in TODO List Apr 14, 2020
@ababaian ababaian moved this from Task In Progress to Open Tasks in TODO List Apr 19, 2020
@ababaian ababaian removed this from Open Tasks in TODO List Dec 9, 2020
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Labels
BASH Scripting / bash related task enhancement New feature or request
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