manual update

docs/symmetry_analysis.rst

@@ -86,12 +86,9 @@ Classify the symmetry of a list of structures is symmetry categories defined by
 - structures: List of Structure type objects to be analyzed
 - symmetry_to_analyze : List of symmetry operations to classify the structures into.
 - shape_to_analyze: Ideal shape of the structures
-- cutoff_shape: Maximum value of shape measurement (defined in shape_to_analyze) to be accepted.
-Structures with a higher value will be discarded.
-- symmetry_threshold: Maximum value of a symmetry measurement of a structure to consider that the
-structure has the measured symmetry.
-- show_plots: If True, graphical data is shown. This includes histrograms showing the distribution
- of symmetry and shape measurements.
+- cutoff_shape: Maximum value of shape measurement (defined in shape_to_analyze) to be accepted. Structures with a higher value will be discarded.
+- symmetry_threshold: Maximum value of a symmetry measurement of a structure to consider that the structure has the measured symmetry.
+- show_plots: If True, graphical data is shown. This includes histrograms showing the distribution of symmetry and shape measurements.
 
 Exemple
 +++++++

docs/symmetry_shape.rst

@@ -22,10 +22,8 @@ shape calculation to perform ::
                                custom_atom_list=None)
 
 - code: corresponds to the shape code available in shape manual. It depends on the number of vertices.
-- central_atom: defines the atom number that will be used as central atom. Atom number uses the same rule as
-:program:`shape` where the first atom is atom number 1. If central_atom is 0 no central atom will be defined.
-- custom_atom_list: defines a list of atoms of the structure that will be used in the shape calculation. If this value
-is None all atoms are used.
+- central_atom: defines the atom number that will be used as central atom. Atom number uses the same rule as :program:`shape` where the first atom is atom number 1. If central_atom is 0 no central atom will be defined.
+- custom_atom_list: defines a list of atoms of the structure that will be used in the shape calculation. If this value is None all atoms are used.
 
 methods
 +++++++
@@ -86,10 +84,8 @@ symmetry calculation to perform ::
 - symmetry: corresponds to the symmetry operation to be measured.
 - label : if True adds %label keyword to symop input (check symop manual for further information).
 - connect : if True adds %connect keyword to symop input (check symop manual for further information).
-- central_atom: defines the atom number that will be used as central atom. Atom number uses the same rule as
-:program:`symop` where the first atom is atom number 1. If central_atom is 0 no central atom will be defined.
-- custom_atom_list: defines a list of atoms of the structure that will be used in the shape calculation. If this value
-is None all atoms are used.
+- central_atom: defines the atom number that will be used as central atom. Atom number uses the same rule as :program:`symop` where the first atom is atom number 1. If central_atom is 0 no central atom will be defined.
+- custom_atom_list: defines a list of atoms of the structure that will be used in the shape calculation. If this value is None all atoms are used.
 
 methods
 +++++++
@@ -125,4 +121,3 @@ example
    $ measure = get_symmetry(structure, input_symop)
    $ print ('The C3 symmetry measure of CH4 is {}'.format(measure))
 
-