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56 Open 79 Closed
56 Open 79 Closed
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Issues list

JSONDecodeError while running
#182 opened May 6, 2024 by abhijitcbio
TPM value difference of a sample between runs
#181 opened May 5, 2024 by abhijitcbio
run isoquant on several samples
#180 opened May 3, 2024 by linalu1121
issue with reference file bug Something isn't working third-party problem Problem is related to other tools, libraries, system etc
#179 opened Apr 30, 2024 by janeshen91
4
Keep CDS feature in final results enhancement New feature or request
#176 opened Apr 23, 2024 by xiekunwhy
1
should extended_annotation.gtf be a superset of the input gtf? bug Something isn't working fixed in dev Issue resolved but not released yet
#175 opened Apr 17, 2024 by jamestwebber
1
Transcript quantification question Further information is requested
#174 opened Apr 16, 2024 by dawangran
3
About poly_requirement option enhancement New feature or request
#173 opened Apr 11, 2024 by hyeon9
2
Error when running test following installation installation Problem with package installation
#169 opened Mar 19, 2024 by TBrownmiller
3
Duplicates of transcript in "OUT.read_assignments.tsv" bug Something isn't working supposedly fixed Issue supposed to be resolved, but not approved yet weird results Something looks odd in the resulting files
#168 opened Mar 14, 2024 by P10911004-NPUST
5
--read_group:file functionality working in release version?
#167 opened Mar 13, 2024 by HabiBBBaghirov
8
IsoQuant with yaml input
#166 opened Mar 12, 2024 by lebronzhong
3
BrokenProcessPool error when mapping single cell data performance Issues related to computational perfromance
#165 opened Mar 12, 2024 by Qirongmao97
7
Novel gene with overlapping coordinates by using reference annotation enhancement New feature or request
#164 opened Mar 12, 2024 by zpliu1126
4
IsoQuant does not produce any counts when model construction is turned off question Further information is requested
#161 opened Mar 4, 2024 by sagnikbanerjee15
8
Question exon/intron counts question Further information is requested
#160 opened Mar 3, 2024 by dawangran
1
Sequence fasta file corresponding to the final output GTF file question Further information is requested
#157 opened Feb 19, 2024 by seongwoohan
1
apply isoquant to single-cell long read data input data Issue is caused by input data question Further information is requested third-party problem Problem is related to other tools, libraries, system etc
#156 opened Feb 17, 2024 by linalu1121
2
SIRVs data enhancement New feature or request fixed in dev Issue resolved but not released yet input data Issue is caused by input data third-party problem Problem is related to other tools, libraries, system etc
#155 opened Feb 16, 2024 by houlinyu
15
feature request: an option for compressing the output files enhancement New feature or request
#154 opened Feb 16, 2024 by jamestwebber
1
geneDB question question Further information is requested
#152 opened Feb 15, 2024 by dawangran
5
IsoQuant extended annotation missing transcripts bug Something isn't working fixed in dev Issue resolved but not released yet
#151 opened Feb 14, 2024 by jcmtnez
1
Prevent IsoQuant from creating any new genes question Further information is requested
#150 opened Feb 13, 2024 by sagnikbanerjee15
1
Bug: missing transcript annotations (present by StringTie) weird results Something looks odd in the resulting files
#148 opened Feb 7, 2024 by sarahcalvo
2
Reference loci missing from extended annotation bug Something isn't working fixed in dev Issue resolved but not released yet
#147 opened Feb 5, 2024 by apollo994
1
ProTip! Updated in the last three days: updated:>2024-05-03.