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@@ -14,3 +14,4 @@ | |
| ^vignettes/.*_cache$ | ||
| ^vignettes/\.pdf$ | ||
| ^codecov\.yml$ | ||
| ^pkgdown$ | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,46 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
| release: | ||
| types: [published] | ||
| workflow_dispatch: | ||
|
|
||
| name: pkgdown | ||
|
|
||
| jobs: | ||
| pkgdown: | ||
| runs-on: ubuntu-latest | ||
| # Only restrict concurrency for non-PR jobs | ||
| concurrency: | ||
| group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
|
|
||
| - uses: r-lib/actions/setup-pandoc@v2 | ||
|
|
||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| use-public-rspm: true | ||
|
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||
| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::pkgdown, local::. | ||
| needs: website | ||
|
|
||
| - name: Build site | ||
| run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE) | ||
| shell: Rscript {0} | ||
|
|
||
| - name: Deploy to GitHub pages 🚀 | ||
| if: github.event_name != 'pull_request' | ||
| uses: JamesIves/github-pages-deploy-action@v4.4.1 | ||
| with: | ||
| clean: false | ||
| branch: gh-pages | ||
| folder: docs |
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|---|---|---|
| @@ -1,56 +1,50 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: | ||
| - master | ||
| - development | ||
| branches: [main, development] | ||
| pull_request: | ||
| branches: | ||
| - master | ||
| - development | ||
| branches: [main, development] | ||
|
|
||
| name: test-coverage | ||
|
|
||
| jobs: | ||
| test-coverage: | ||
| runs-on: macOS-latest | ||
|
|
||
| runs-on: ubuntu-latest | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
|
|
||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - uses: actions/checkout@v3 | ||
|
|
||
| - uses: r-lib/actions/setup-r@master | ||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| use-public-rspm: true | ||
|
|
||
| - uses: r-lib/actions/setup-pandoc@master | ||
| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::covr | ||
| needs: coverage | ||
|
|
||
| - name: Query dependencies | ||
| - name: Test coverage | ||
| run: | | ||
| install.packages('remotes') | ||
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | ||
| writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | ||
| covr::codecov( | ||
| quiet = FALSE, | ||
| clean = FALSE, | ||
| install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package") | ||
| ) | ||
| shell: Rscript {0} | ||
|
|
||
| - name: Install additional dependencies | ||
| - name: Show testthat output | ||
| if: always() | ||
| run: | | ||
| remotes::install_github('PredictiveEcology/Require@development') | ||
| remotes::install_github('PredictiveEcology/reproducible@development') | ||
| shell: Rscript {0} | ||
| ## -------------------------------------------------------------------- | ||
| find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
| shell: bash | ||
|
|
||
| - name: Cache R packages | ||
| uses: actions/cache@v1 | ||
| - name: Upload test results | ||
| if: failure() | ||
| uses: actions/upload-artifact@v3 | ||
| with: | ||
| path: ${{ env.R_LIBS_USER }} | ||
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | ||
| restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | ||
|
|
||
| - name: Install dependencies | ||
| run: | | ||
| install.packages(c("remotes")) | ||
| remotes::install_deps(dependencies = TRUE) | ||
| remotes::install_cran("covr") | ||
| shell: Rscript {0} | ||
|
|
||
| - name: Test coverage | ||
| run: covr::codecov() | ||
| shell: Rscript {0} | ||
| name: coverage-test-failures | ||
| path: ${{ runner.temp }}/package |
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| Original file line number | Diff line number | Diff line change |
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|
@@ -2,5 +2,6 @@ | |
| .Rhistory | ||
| .Rproj.user | ||
| .Ruserdata | ||
| docs | ||
| vignettes/*_cache | ||
| vignettes/*_files | ||
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|
@@ -68,4 +68,3 @@ Collate: | |
| 'zzz.R' | ||
| Encoding: UTF-8 | ||
| Language: en-CA | ||
| RoxygenNote: 7.1.1 | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,6 +1,16 @@ | ||
| destination: docs | ||
| template: | ||
| params: | ||
| bootswatch: flatly | ||
| ganalytics: UA-34446208-1 | ||
| bootstrap: 5 | ||
| bootswatch: flatly | ||
| includes: | ||
| in_header: | | ||
| <!-- Global site tag (gtag.js) - Google Analytics --> | ||
| <script async src="https://www.googletagmanager.com/gtag/js?id=G-SBRW4YWBD0"></script> | ||
| <script> | ||
| window.dataLayer = window.dataLayer || []; | ||
| function gtag(){dataLayer.push(arguments);} | ||
| gtag('js', new Date()); | ||
| gtag('config', 'G-SBRW4YWBD0'); | ||
| </script> | ||
| url: https://alexchubaty.com/grainscape |
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