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autogen.sh: Only call autoreconf to generate build system files
autoreconf calls libtoolize and other autotools commands as needed to generate and install build system files, as described in the man page. The documentation cautions against using aclocal as it may be removed in the future; it recommends simply calling autoreconf in place of calling individual commands to remain forwards compatible: https://www.gnu.org/software/automake/manual/html_node/Future-of-aclocal.html Signed-off-by: David Ward <david.ward@ll.mit.edu>
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