chiral

The chiral path directory includes the plumed patch for using the chiral path CVs (Pietropaolo, Branduardi, Bonomi, Parrinello, J. Comput. Chem. 2011, 32,2627) under PLUMED package. The chirality_index directories include the codes for calculating the chirality indexes from coordinates, as described in Pietropaolo, Muccioli, Berardi, Zannoni PROTEINS, 2008, 70,667.