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Pinned

  1. omicsedge/selphi omicsedge/selphi Public

    weighted-PBWT genotype imputation algorithm

    Python 1

  2. selfdecode/rd-imputation-accuracy selfdecode/rd-imputation-accuracy Public

    Phasing and genotype Imputation comparison. Have been evaluated: BEAGLE 5.4, EAGLE 2.4.1, SHAPEIT 4, MINIMAC 4, IMPUTE 5, using accuracy metrics like: IQS(Imputation Quality score), r2 (Pearson cor…

    Python 21 3

  3. Imputation_beagle_tutorial Imputation_beagle_tutorial Public

    Imputation-beagle-tutorial

    26 2

  4. Detect-and-remove-outliers Detect-and-remove-outliers Public

    In statistics, an outlier is an observation point that is distant from other observations. How we can filter out these values using python?

    Python 5 1

  5. build-detection-VCF build-detection-VCF Public

    Detect a build from a VCF/BCF in python

    Python

  6. Determine_sex_from_bam Determine_sex_from_bam Public

    Get sex info from BAM file

    Python 4