Merge pull request psychoinformatics-de#5 from mih/master

Modernization

.gitattributes

@@ -0,0 +1 @@
+datalad_helloworld/_version.py export-subst

.github/workflows/docbuild.yml

@@ -0,0 +1,27 @@
+name: docs
+
+on: [push, pull_request]
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+
+    steps:
+    - name: Set up environment
+      run: |
+        git config --global user.email "test@github.land"
+        git config --global user.name "GitHub Almighty"
+    - uses: actions/checkout@v1
+    - name: Set up Python 3.8
+      uses: actions/setup-python@v1
+      with:
+        python-version: 3.8
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        pip install -r requirements-devel.txt
+        pip install .
+    - name: Build docs
+      run: |
+        make -C docs html

.github/workflows/test_crippledfs.yml

@@ -0,0 +1,55 @@
+name: crippled-filesystems
+
+on: [pull_request]
+
+jobs:
+  test:
+
+    runs-on: ubuntu-latest
+
+    steps:
+    - name: Set up system
+      shell: bash
+      run: |
+        bash <(wget -q -O- http://neuro.debian.net/_files/neurodebian-travis.sh)
+        # enable repo for devel git-annex, if needed
+        #sudo sed -e 's|\(deb.*data\)|#\1|' -e 's|/debian |/debian-devel |' /etc/apt/sources.list.d/neurodebian.sources.list | sudo tee /etc/apt/sources.list.d/neurodebian-devel.sources.list
+        sudo apt-get update -qq
+        sudo apt-get install eatmydata
+        sudo eatmydata apt-get install git-annex-standalone dosfstools
+        # 500 MB VFAT FS in a box
+        sudo dd if=/dev/zero of=/crippledfs.img count=500 bs=1M
+        sudo mkfs.vfat /crippledfs.img
+        # mount
+        sudo mkdir /crippledfs
+        sudo mount -o "uid=$(id -u),gid=$(id -g)" /crippledfs.img /crippledfs
+    - name: Set up environment
+      run: |
+        git config --global user.email "test@github.land"
+        git config --global user.name "GitHub Almighty"
+    - uses: actions/checkout@v1
+    - name: Set up Python 3.5
+      uses: actions/setup-python@v1
+      with:
+        python-version: 3.5
+    - name: Install dependencies
+      run: |
+        pip install -r requirements-devel.txt
+        python -m pip install --upgrade pip
+    - name: Installation
+      run: |
+        # package install
+        python -m pip install .
+    - name: Run tests
+      env:
+        # forces all test repos/paths into the VFAT FS
+        TMPDIR: /crippledfs
+      run: |
+        mkdir -p __testhome__
+        cd __testhome__
+        # give detailed info on actual test setup
+        datalad wtf
+        echo "== mount >>"
+        mount
+        echo "<< mount =="
+        python -m nose -s -v --with-doctest --with-coverage --cover-package datalad_helloworld datalad_helloworld

.github/workflows/test_win2019.yml

@@ -0,0 +1,47 @@
+name: win2019
+
+on: [push, pull_request]
+
+jobs:
+  test:
+
+    runs-on: windows-2019
+
+    steps:
+    - name: Configure windows system
+      run: |
+        # https://support.microsoft.com/en-us/help/121007/how-to-disable-8-3-file-name-creation-on-ntfs-partitions
+        fsutil.exe behavior set disable8dot3 1
+    - name: Set up environment
+      run: |
+        git config --global user.email "test@github.land"
+        git config --global user.name "GitHub Almighty"
+    - uses: actions/checkout@v1
+    # on windows it makes sense to aim for the latest, nothing comes with the system
+    # anyways
+    - name: Set up Python 3.8
+      uses: actions/setup-python@v1
+      with:
+        python-version: 3.8
+    - name: Set up git-annex
+      run: |
+        # latest version
+        python -c "import urllib.request as r; r.urlretrieve('https://downloads.kitenet.net/git-annex/windows/current/git-annex-installer.exe', 'C:\\git-annex-installer.exe')"
+        # specific version mih uses to debug on real win10 box
+        7z x -o"C:\\Program Files\Git" C:\\git-annex-installer.exe
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        pip install -r requirements-devel.txt
+        pip install colorama
+    - name: Installation
+      run: |
+        # package install
+        python -m pip install .
+    - name: Run tests
+      run: |
+        mkdir -p __testhome__
+        cd __testhome__
+        # give detailed info on actual test setup
+        datalad wtf
+        python -m nose -s -v --with-doctest --with-coverage --cover-package datalad_helloworld datalad_helloworld

.gitignore

@@ -5,5 +5,8 @@
 *.py[coe]
 .#*
 .*.swp
+pip-wheel-metadata
 docs/build
 docs/source/generated
+build/
+dist/

.travis.yml

@@ -3,9 +3,10 @@
 language: python
 
 python:
-  - 2.7
+  # minium version
   - 3.5
-  - 3.6
+  # "latest"
+  - 3.8
 
 cache:
   - apt
@@ -14,18 +15,12 @@ env:
   global:
     # will be used in the matrix, where neither other variable is used
     - BOTO_CONFIG=/tmp/nowhere
-    - DATALAD_TESTS_SSH=1
     - DATALAD_LOG_CMD_ENV=GIT_SSH_COMMAND
-    - TESTS_TO_PERFORM=
+    - TESTS_TO_PERFORM=datalad_helloworld
     - NOSE_OPTS=-s
-    - NOSE_SELECTION_OP="not "   # so it would be "not (integration or usecase)"
     # Special settings/helper for combined coverage from special remotes execution
     - COVERAGE=coverage
     - DATALAD_DATASETS_TOPURL=http://datasets-tests.datalad.org
-  matrix:
-    - DATALAD_REPO_VERSION=5
-    - DATALAD_REPO_VERSION=6
-
 
 before_install:
   # Just in case we need to check if nfs is there etc
@@ -37,12 +32,12 @@ before_install:
 
 install:
   # Install standalone build of git-annex for the recent enough version
-  - travis_retry sudo eatmydata apt-get install zip pandoc
+  - travis_retry sudo eatmydata apt-get install zip git-annex-standalone 
   # for metadata support
   - git config --global user.email "test@travis.land"
   - git config --global user.name "Travis Almighty"
   - cd ..; pip install -q codecov; cd -
-  - pip install -r requirements.txt
+  - pip install -r requirements-devel.txt
   #- pip install 'sphinx>=1.6.2'
   # So we could test under sudo -E with PATH pointing to installed location
   - sudo sed -i -e 's/^Defaults.*secure_path.*$//' /etc/sudoers
@@ -52,20 +47,20 @@ script:
   - python setup.py build
   # Test installation system-wide
   - sudo pip install .
+  - mkdir -p __testhome__
+  - cd __testhome__
+  # Report WTF information using system wide installed version
+  - datalad wtf
   # Run tests
   - http_proxy=
     PATH=$PWD/tools/coverage-bin:$PATH
     $NOSE_WRAPPER `which nosetests` $NOSE_OPTS
-      -v -A "$NOSE_SELECTION_OP(integration or usecase or slow)"
+      -v
       --with-doctest
-      --with-cov --cover-package datalad_helloworld
+      --with-coverage --cover-package datalad_helloworld
       --logging-level=INFO
       $TESTS_TO_PERFORM
-  #- if [ ! "${DATALAD_LOG_LEVEL:-}" = 2 ]; then
-  #      PYTHONPATH=$PWD $NOSE_WRAPPER make -C docs html doctest;
-  #  fi
-  # Report WTF information using system wide installed version
-  - datalad wtf
+  - cd ..
 
 after_success:
   - coverage combine -a /tmp/.coverage-entrypoints-*

MANIFEST.in

@@ -0,0 +1,2 @@
+include versioneer.py
+include datalad_helloworld/_version.py

Makefile

@@ -0,0 +1,14 @@
+PYTHON ?= python
+
+clean:
+	$(PYTHON) setup.py clean
+	rm -rf dist build bin docs/build docs/source/generated *.egg-info
+	-find . -name '*.pyc' -delete
+	-find . -name '__pycache__' -type d -delete
+
+release-pypi:
+	# avoid upload of stale builds
+	test ! -e dist
+	$(PYTHON) setup.py sdist
+	python setup.py bdist_wheel --universal
+	twine upload dist/*

README.md

@@ -1,6 +1,7 @@
 # DataLad extension template
 
-[![Travis tests status](https://secure.travis-ci.org/datalad/datalad-extension-template.png?branch=master)](https://travis-ci.org/datalad/datalad-extension-template) [![codecov.io](https://codecov.io/github/datalad/datalad-extension-template/coverage.svg?branch=master)](https://codecov.io/github/datalad/datalad-extension-template?branch=master)
+[![Travis tests status](https://secure.travis-ci.org/datalad/datalad-extension-template.png?branch=master)](https://travis-ci.org/datalad/datalad-extension-template) [![codecov.io](https://codecov.io/github/datalad/datalad-extension-template/coverage.svg?branch=master)](https://codecov.io/github/datalad/datalad-extension-template?branch=master) [![crippled-filesystems](https://github.com/datalad/datalad-extension-template/workflows/crippled-filesystems/badge.svg)](https://github.com/datalad/datalad-extension-template/actions?query=workflow%3Acrippled-filesystems) [![win2019](https://github.com/datalad/datalad-extension-template/workflows/win2019/badge.svg)](https://github.com/datalad/datalad-extension-template/actions?query=workflow%3Awin2019)  [![docs](https://github.com/datalad/datalad-extension-template/workflows/docs/badge.svg)](https://github.com/datalad/datalad-extension-template/actions?query=workflow%3Adocs)
+
 
 This repository contains an extension template that can serve as a starting point
 for implementing a [DataLad](http://datalad.org) extension. An extension can

datalad_helloworld/__init__.py

@@ -30,7 +30,7 @@
             # optional name of the command in the cmdline API
             'hello-cmd',
             # optional name of the command in the Python API
-            'hello_py'
+            'hello_cmd'
         ),
     ]
 )
@@ -95,3 +95,7 @@ def __call__(language='en'):
 
 from datalad import setup_package
 from datalad import teardown_package
+
+from ._version import get_versions
+__version__ = get_versions()['version']
+del get_versions