Periodic Tests #350
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| name: Periodic Tests | |
| on: | |
| schedule: | |
| # every day at 1:30 AM UTC | |
| - cron: "30 1 * * *" | |
| workflow_dispatch: | |
| concurrency: | |
| group: ${{ github.workflow }} | |
| cancel-in-progress: true | |
| jobs: | |
| check-manifest: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Run check-manifest | |
| uses: pre-commit/action@v3.0.1 | |
| with: | |
| extra_args: check-manifest --hook-stage manual | |
| pre-commit: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Run pre-commit | |
| uses: pre-commit/action@v3.0.1 | |
| with: | |
| extra_args: --all-files | |
| run-notebook-examples: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Use numba cache to set env variables but not restore cache | |
| uses: ./.github/actions/numba_cache | |
| with: | |
| cache_name: "run-notebook-examples" | |
| runner_os: ${{ runner.os }} | |
| python_version: "3.10" | |
| restore_cache: "false" | |
| - name: Install dependencies | |
| uses: nick-fields/retry@v3 | |
| with: | |
| timeout_minutes: 30 | |
| max_attempts: 3 | |
| command: python -m pip install .[all_extras,binder,dev] | |
| - name: Run example notebooks | |
| run: build_tools/run_examples.sh false | |
| shell: bash | |
| - name: Save new cache | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ github.workspace }}/.numba_cache | |
| # Save cache with the current date (ENV set in numba_cache action) | |
| key: numba-run-notebook-examples-${{ runner.os }}-3.10-${{ env.CURRENT_DATE }} | |
| test-no-soft-deps: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Use numba cache to set env variables but not restore cache | |
| uses: ./.github/actions/numba_cache | |
| with: | |
| cache_name: "test-no-soft-deps" | |
| runner_os: ${{ runner.os }} | |
| python_version: "3.10" | |
| restore_cache: "false" | |
| - name: Install aeon and dependencies | |
| uses: nick-fields/retry@v3 | |
| with: | |
| timeout_minutes: 30 | |
| max_attempts: 3 | |
| command: python -m pip install .[dev] | |
| - name: Show dependencies | |
| run: python -m pip list | |
| - name: Run tests | |
| run: python -m pytest -n logical | |
| - name: Save new cache | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ github.workspace }}/.numba_cache | |
| # Save cache with the current date (ENV set in numba_cache action) | |
| key: numba-test-no-soft-deps-${{ runner.os }}-3.10-${{ env.CURRENT_DATE }} | |
| pytest: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ ubuntu-20.04, macOS-13, windows-2022 ] | |
| python-version: [ "3.8", "3.9", "3.10", "3.11", "3.12" ] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Use numba cache to set env variables but not restore cache | |
| uses: ./.github/actions/numba_cache | |
| with: | |
| cache_name: "pytest" | |
| runner_os: ${{ runner.os }} | |
| python_version: ${{ matrix.python-version }} | |
| restore_cache: "false" | |
| - name: Install aeon and dependencies | |
| uses: nick-fields/retry@v3 | |
| with: | |
| timeout_minutes: 30 | |
| max_attempts: 3 | |
| command: python -m pip install .[all_extras,dev] | |
| - name: Show dependencies | |
| run: python -m pip list | |
| - name: Run tests | |
| run: python -m pytest -n logical | |
| - name: Save new cache | |
| uses: actions/cache/save@v4 | |
| with: | |
| path: ${{ github.workspace }}/.numba_cache | |
| # Save cache with the current date (ENV set in numba_cache action) | |
| key: numba-pytest-${{ runner.os }}-${{ matrix.python-version}}-${{ env.CURRENT_DATE }} | |
| codecov: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Disable Numba JIT | |
| run: echo "NUMBA_DISABLE_JIT=1" >> $GITHUB_ENV | |
| - name: Install aeon and dependencies | |
| uses: nick-fields/retry@v3 | |
| with: | |
| timeout_minutes: 30 | |
| max_attempts: 3 | |
| command: python -m pip install .[all_extras,unstable_extras,dev] | |
| - name: Show dependencies | |
| run: python -m pip list | |
| - name: Run tests | |
| run: python -m pytest -n logical --cov=aeon --cov-report=xml --timeout 1800 | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |