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A Python notebook to create .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters and markers, compatible with SCope

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SCopeLoomPy v0.1.0

A Python package to create .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters and markers, compatible with SCope.

Installation

pip install git+https://github.com/aertslab/SCopeLoomPy.git

Version History

July 4, 2018

  • Version 0.1.0
    • Changes:
      • Add feature to store metrics in the .loom and make them queryable in SCope.

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A Python notebook to create .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters and markers, compatible with SCope

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