add useful actions workflows

- assign reviewers (currently only kaitj and tkkuehn, can add more)
- bump_version for semantic versioning
- release to publish to pypi
- test for linting and unit testing

.github/auto_assign.yml

@@ -0,0 +1,26 @@
+---
+# Set to true to add reviewers to pull requests
+addReviewers: true
+
+# Set to true to add assignees to pull requests
+addAssignees: author
+# A list of reviewers to be added to pull requests (GitHub user name)
+reviewers:
+  - kaitj
+  - tkkuehn
+# A number of reviewers added to the pull request
+# Set 0 to add all the reviewers (default: 0)
+numberOfReviewers: 0
+
+# A list of assignees, overrides reviewers if set
+# assignees:
+#   - assigneeA
+
+# A number of assignees to add to the pull request
+# Set to 0 to add all of the assignees.
+# Uses numberOfReviewers if unset.
+# numberOfAssignees: 2
+
+# A list of keywords to be skipped the process that add reviewers if pull requests include it
+# skipKeywords:
+#   - wip

.github/release-drafter.yml

@@ -0,0 +1,28 @@
+---
+name-template: $RESOLVED_VERSION
+tag-template: v$RESOLVED_VERSION
+filter-by-commitish: true
+template: |
+  ## Changes
+  $CHANGES
+categories:
+  - title: 🚀 Features
+    labels: [breaking, enhancement]
+  - title: 🐛 Bug Fixes
+    labels: [bug]
+  - title: 🧰 Maintenance
+    labels: [maintenance, test]
+  - title: 📝 Documentation
+    labels: [documentation]
+exclude-labels: [skip_changelog]
+change-template: '- $TITLE @$AUTHOR (#$NUMBER)'
+change-title-escapes: \<*_&    # You can add  # and @ to disable mentions, and add ` to disable code blocks.
+version-resolver:
+  # major:
+  #   labels:
+  #     - 'breaking'
+  minor:
+    labels: [breaking, enhancement]
+  patch:
+    labels: [maintenance, bug, test, documentation]
+  default: patch

.github/workflow/assign_reviewers.yml

@@ -0,0 +1,14 @@
+---
+name: Assign reviewer
+on:
+  pull_request_target:
+    types: [opened, ready_for_review]
+jobs:
+  assign:
+    runs-on: ubuntu-latest
+    if: github.event.pull_request.assignee == null
+    steps:
+      - name: Assign reviewer
+        uses: kentaro-m/auto-assign-action@v1.2.4
+        with:
+          repo-token: ${{ secrets.GITHUB_TOKEN }}

.github/workflow/bump_version.yml

@@ -0,0 +1,66 @@
+---
+name: Bump version
+on:
+  pull_request_target:
+    types: [closed]
+jobs:
+  build:
+    if: github.event.pull_request.merged == true
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout master branch
+        uses: actions/checkout@master
+        with:
+          ref: ${{ github.event.pull_request.base.ref }}
+      - name: Update changelog
+        uses: release-drafter/release-drafter@v5
+        id: release-drafter
+        with:
+          commitish: ${{ github.event.pull_request.base.ref }}
+        env:
+          GITHUB_TOKEN: ${{ secrets.BP_PAT_TOKEN }}
+      - name: Get previous release version
+        run: |
+          echo "PREV_VER=$(cat pyproject.toml | grep -o -E '(version\s=\s)([[:punct:]])([0-9]+\.[0-9]+\.[0-9]+.+)([[:punct:]])' | cut -d ' ' -f 3 | tr -d '"')" >> $GITHUB_ENV
+      - name: Get previous bump version
+        env:
+          PREV_VER: ${{ env.PREV_VER }}
+        run: |
+          if [[ "$PREV_VER" != *"-pre."* ]]; then
+            echo "OLD_BUMP=0" >> $GITHUB_ENV
+          else
+            echo "OLD_BUMP=$(echo $PREV_VER | cut -d '.' -f 4)" >> $GITHUB_ENV
+          fi
+      - name: Bump version
+        env:
+          BUMP_VER: ${{ env.OLD_BUMP }}
+        run: |
+          echo "NEW_BUMP=$(($BUMP_VER + 1))" >> $GITHUB_ENV
+      - name: Set new release version
+        env:
+          RD_RELEASE: ${{ steps.release-drafter.outputs.name }}
+        run: |
+          if [ ! -z "$RD_RELEASE" ]; then
+            echo "NEW_RELEASE=$RD_RELEASE" >> $GITHUB_ENV
+          else
+            echo "NEW_RELEASE=0.1.0" >> $GITHUB_ENV
+          fi
+      - name: Update version in pyproject.toml
+        uses: jacobtomlinson/gha-find-replace@master
+        with:
+          include: pyproject.toml
+          find: version = "(?:([0-9]+\.[0-9]+\.[0-9]+.+)|([0-9]+\.[0-9]+\.[0-9]+))"
+          replace: version = "${{ env.NEW_RELEASE }}-pre.${{ env.NEW_BUMP }}"
+      - name: Commit updates
+        env:
+          SNAKEBIDS_VERSION: ${{ env.NEW_RELEASE }}-pre.${{ env.NEW_BUMP }}
+        run: |
+          git config --local user.email "41898282+github-actions[bot]@users.noreply.github.com"
+          git config --local user.name "github-actions[bot]"
+          git diff-index --quiet HEAD || git commit -m "Bump version to $SNAKEBIDS_VERSION" -a
+      - name: Push changes
+        uses: CasperWA/push-protected@v2
+        with:
+          branch: ${{ github.event.pull_request.base.ref }}
+          token: ${{ secrets.BP_PAT_TOKEN }}
+          unprotect_reviews: true

.github/workflow/release.yml

@@ -0,0 +1,66 @@
+---
+name: Release package
+on:
+  workflow_dispatch:
+    inputs:
+      comments:
+        description: Comments
+        required: false
+jobs:
+  release_changelog:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Print author
+        run: |
+          echo "Author: ${{ github.triggering_actor }}"
+          echo "Comments: ${{ github.event.inputs.comments }}"
+      - name: Extract branch name
+        shell: bash
+        id: extract_branch
+        run: echo "##[set-output name=branch;]$(echo ${GITHUB_REF#refs/heads/})"
+      - uses: actions/checkout@master
+        with:
+          ref: ${{ steps.extract_branch.outputs.branch }}
+      - name: Draft change log
+        uses: release-drafter/release-drafter@v5
+        id: release-drafter
+        with:
+          commitish: ${{ steps.extract_branch.outputs.branch }}
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+      - name: Set new release version
+        env:
+          RD_RELEASE: ${{ steps.release-drafter.outputs.name }}
+        run: |
+          if [ ! -z "$RD_RELEASE" ]; then
+            echo "NEW_RELEASE=$RD_RELEASE" >> $GITHUB_ENV
+          else
+            echo "NEW_RELEASE=0.1.0" >> $GITHUB_ENV
+          fi
+      - name: Update version in pyproject.toml
+        uses: jacobtomlinson/gha-find-replace@master
+        with:
+          include: pyproject.toml
+          find: version = "(?:([0-9]+\.[0-9]+\.[0-9]+.+)|([0-9]+\.[0-9]+\.[0-9]+))"
+          replace: version = "${{ env.NEW_RELEASE }}"
+      - name: Commit updates
+        env:
+          LATEST_VERSION: ${{ env.NEW_RELEASE }}
+        run: |
+          git config --local user.email "41898282+github-actions[bot]@users.noreply.github.com"
+          git config --local user.name "github-actions[bot]"
+          git diff-index --quiet HEAD || git commit -m "Bump version to $LATEST_VERSION" -a
+      - name: Push changes
+        uses: CasperWA/push-protected@v2
+        with:
+          token: ${{ secrets.BP_PAT_TOKEN }}
+          unprotect_reviews: true
+      - name: Publish change log
+        uses: release-drafter/release-drafter@v5
+        with:
+          commitish: ${{ steps.extract_branch_outputs.branch }}
+          publish: true
+          name: ${{ env.NEW_RELEASE }}
+          tag: v${{ env.NEW_RELEASE }}
+        env:
+          GITHUB_TOKEN: ${{ secrets.BP_PAT_TOKEN }}

.github/workflow/test.yml

@@ -0,0 +1,82 @@
+---
+name: Lint and test workflow
+on:
+  push:
+    branches: ['*', '!push-action/*']
+  pull_request:
+    branches: ['*', '!push-action/*']
+jobs:
+  quality:
+    name: Lint code
+    if: github.event.pull_request.merged == false
+    runs-on: ubuntu-latest
+    steps:
+      - name: Clone repo
+        uses: actions/checkout@master
+      - name: Setup Python 3.10
+        uses: actions/setup-python@v4
+        with:
+          python-version: '3.10'
+      - uses: actions/cache@v3
+        with:
+          path: ~/.cache/pip
+          key: ${{ runner.os }}-pip-3.10
+          restore-keys: ${{ runner.os }}-pip-3.10
+      - name: Install Poetry
+        uses: snok/install-poetry@v1
+        with:
+          virtualenvs-create: true
+          virtualenvs-in-project: true
+      - name: Load cached venv
+        id: cached-poetry-dependencies
+        uses: actions/cache@v3
+        with:
+          path: .venv
+          key: venv-${{ runner.os }}-${{ hashFiles('**/poetry.lock') }}-3.10
+      - name: Install dependencies
+        if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true'
+        run: poetry install --no-interaction --no-root --with dev
+      - name: yamlfix
+        run: poetry run poe yamlfix-check
+      - name: isort
+        run: poetry run poe isort-check
+      - name: black
+        run: poetry run poe black-check
+      - name: ruff
+        run: poetry run poe ruff-check
+  test:
+    runs-on: ubuntu-latest
+    needs: [quality]
+    strategy:
+      matrix:
+        python-version: ['3.8', '3.9', '3.10']
+    steps:
+      - name: Clone repo
+        uses: actions/checkout@master
+      - name: Select Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+      - uses: actions/cache@v3
+        with:
+          path: ~/.cache/pip
+          key: ${{ runner.os }}-pip-${{ matrix.python-version }}
+          restore-keys: ${{ runner.os }}-pip-${{ matrix.python-version }}
+      - name: Install Poetry
+        uses: snok/install-poetry@v1
+        with:
+          virtualenvs-create: true
+          virtualenvs-in-project: true
+      - name: Load cached venv
+        id: cached-poetry-dependencies
+        uses: actions/cache@v3
+        with:
+          path: .venv
+          key: venv-${{ runner.os }}-${{ hashFiles('**/poetry.lock') }}-${{ matrix.python-version
+            }}
+      - name: Install dependencies
+        if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true'
+        run: poetry install --no-interaction --no-root --with dev
+        # Example of test
+      # - name: Test minimum inputs
+        # run: poetry run poe test_base